LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops2g03536	ATGGCTTCAAATCTTATTGCTTTCTTCCTTGTCGTTCTTGTCTTTCTTCCCCTCAAATCTCAGTCTTTTGCAGAGACACCCTCGTGGGTGAAAGCTTGTTATTACTATTCTGGCAATGAAATATCTGCTTCAGACATAGAAGCCACGCTTTTCAATCACCTCTTATGCGCTTTTGCTTTTATAAACTCCACCAACTACAAGATCTTTATCAACTCTTCGGAGGAGCACAAGTTCGCCACCTTCACTAACACAGTAAAGCTCCAAAACCCATCTGTTTCAACTCTTCTATCCATCTGGGGTGGTAGAGAGGACTCGTCAGTTTTCACCTCTATGCTAAACCAATCTTCCTATAGAAAATCTTTTATTGATTCTACCATCAGAGCAGCAAGGCAACATGGTTTTCAGGGCATAGACCTTTATGGGGTATGGCCAAGGCAGGGTAAGGACCTTGCCAATTTTGGAACCCTTTTGAAGGAGTGGCGAGCTGCAATATCCTCCGAGGCAAGAAACTCTAGCAAGTCAGAGTTAATATTGGTGATGTCAGGGTACTACCTTAAAGCTTCGGACTCCTTAAATTACCCCTTTGAATCAATGCAGATGAACTTGGATTGGGTGCATTTTGTGGCATATGATTACTACCTTCCTAGAAAGGACAACGTTACGGGTTTTCATGCGGCTTTATATGGTCCATCTGATTGGGATAACACTGACTATGGTATCAGAGAGTGGAGGAGAAGGGGATTTTCATCTAGCAAGTTGGTAATTGGCTTGCCTTATCATGGATATGCATGGACACTTGTGAACCCAGGAAACAAAGGCGTGGGAACACCAGCATCAGGACCTGCCATTACAATGGCTGGTTCCATGGGTTATAAATTGATAAAGAGTTACATTAGAAGCTTTGGAGATGGAGTTGTTTCAAATTATAATGCAACTATTGTGGTGAATGAATTCACAGTTGCATCCACCACTTGGGTTAATTTTGACGATGTGGAAGTAATAAGGGAAAAAGTTTCTTATGCAAAGAAAAATGGACTACTTGGTTATAACGTGTTCCAAGTAGGCAATGATGAGAATTGGGTCCTTTCAAGGGCAGCTCAAGAAGTAGATGAAGATCATCATAAGAGCAGGTTGCTGATAATTGTTCTGCCCACAACTCTGACACTCGCACTTCTATTGGGAATAGCATTCTGCTTCTACCACCAAGGCACGGCAGCCACTTTTACAAGAATATTATATAAACTAAGACGTTCATCAGAAGCTGATAAAGATCTCGACGGAAATGCTTCTGATCTGATAGTATTCAGTTATCTCACCATTAAAGTGGCTACAGAGAACTTCTCAAAAGATAATAAGCTTGGAGAGGGGGGATTTGGCACAGTATACAAGGGAAAATTACGGAAGGGACAGGAAATAGCTGTAAAAAGACTCTCAGAAACCTCAAATCAAGGCCTTGAAGAGTTCAAAAATGAGATCTCGCTTACAGCTAGACTTCAACATGTGAATTTAGTTAGACTTCTGGGTTACAACACAAAAAGGGATGAGAAGATTCTGATCTATGAATACCTACCAAACAAAAGCTTTGATCATTTCCTCTTTGGAGTTACTCAAGGCCTTCTTTATCTCCAGGAGTACTCGAATTACACTATAATCCACCGAGATCTTAAAGCTAGTAATGTTCTGTTAGATCATGAGATGAATCCCAAGATATCAGATTTTGGTATGGCTAGAATATTCAGGAAATGTGAACTTGAGGCAAACACAAGCAGGATCGTGGGAACATATGGGTATGTACCTCCTGAGTATGTGAGAAGAGGCATATACTCAACAAAGTATGACGTTTATAGTTTTGGAGTTCTTCTCTTGCAAATCATAAGCGGAAAGAGGACTTCGTGTTATTATGGCTTGCATGAAAATATGAACCTTTTGGAATATGCATATGAGCTGTGGAAGGAAGACAGAGGTGTGGAGTTTGTTGACCCCTCATTGGATGATACATCATCATCTTGTAAAATCATGAGATGCATGCAGGTGGCCCTGTTGTGTGTTCAAGACAACTCTACAGATAGACCTTCCATGTTAGAAGTTGATTCACTGTTGAAGAATGAAGCTGCAGTTATTGGTACTCCCAAAATGCCAGCTTTTTCAATTAACAAACATGAAGATGAGGAAGAAACATCTCACTCCAGGATCAAACTTTCTTCAATCAATAACGTTACAATTTCTCAACTGGCACCAAGATTGTACAATCACTTTCAACTAGAGGATCTACAGCTTATATAA	2283	0.4043	MASNLIAFFLVVLVFLPLKSQSFAETPSWVKACYYYSGNEISASDIEATLFNHLLCAFAFINSTNYKIFINSSEEHKFATFTNTVKLQNPSVSTLLSIWGGREDSSVFTSMLNQSSYRKSFIDSTIRAARQHGFQGIDLYGVWPRQGKDLANFGTLLKEWRAAISSEARNSSKSELILVMSGYYLKASDSLNYPFESMQMNLDWVHFVAYDYYLPRKDNVTGFHAALYGPSDWDNTDYGIREWRRRGFSSSKLVIGLPYHGYAWTLVNPGNKGVGTPASGPAITMAGSMGYKLIKSYIRSFGDGVVSNYNATIVVNEFTVASTTWVNFDDVEVIREKVSYAKKNGLLGYNVFQVGNDENWVLSRAAQEVDEDHHKSRLLIIVLPTTLTLALLLGIAFCFYHQGTAATFTRILYKLRRSSEADKDLDGNASDLIVFSYLTIKVATENFSKDNKLGEGGFGTVYKGKLRKGQEIAVKRLSETSNQGLEEFKNEISLTARLQHVNLVRLLGYNTKRDEKILIYEYLPNKSFDHFLFGVTQGLLYLQEYSNYTIIHRDLKASNVLLDHEMNPKISDFGMARIFRKCELEANTSRIVGTYGYVPPEYVRRGIYSTKYDVYSFGVLLLQIISGKRTSCYYGLHENMNLLEYAYELWKEDRGVEFVDPSLDDTSSSCKIMRCMQVALLCVQDNSTDRPSMLEVDSLLKNEAAVIGTPKMPAFSINKHEDEEETSHSRIKLSSINNVTISQLAPRLYNHFQLEDLQLI*	761

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops2g03536	760	SUPERFAMILY	(Trans)glycosidases	29	371	IPR017853	-
	Rops2g03536	760	PANTHER	PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA	354	745	-	-
	Rops2g03536	760	ProSiteProfiles	Protein kinase domain profile.	447	700	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Rops2g03536	760	Pfam	Glycosyl hydrolases family 18	34	357	IPR001223	GO:0005975
	Rops2g03536	760	SMART	serkin_6	447	706	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Rops2g03536	760	Gene3D	-	259	328	IPR029070	-
	Rops2g03536	760	FunFam	Uncharacterized protein	422	522	-	-
	Rops2g03536	760	Gene3D	Transferase(Phosphotransferase) domain 1	519	709	-	-
	Rops2g03536	760	CDD	GH18_plant_chitinase_class_V	27	363	-	-
	Rops2g03536	760	SMART	2g34	29	357	IPR011583	GO:0008061
	Rops2g03536	760	ProSitePatterns	Protein kinases ATP-binding region signature.	453	475	IPR017441	GO:0005524
	Rops2g03536	760	FunFam	Lectin-domain containing receptor kinase A4.3	520	719	-	-
	Rops2g03536	760	Gene3D	Glycosidases	44	358	-	-
	Rops2g03536	760	ProSiteProfiles	Glycosyl hydrolases family 18 (GH18) domain profile.	29	373	IPR001223	GO:0005975
	Rops2g03536	760	SUPERFAMILY	Chitinase insertion domain	261	328	IPR029070	-
	Rops2g03536	760	Pfam	Protein kinase domain	448	693	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Rops2g03536	760	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	550	562	IPR008271	GO:0004672\|GO:0006468
	Rops2g03536	760	SUPERFAMILY	Protein kinase-like (PK-like)	431	727	IPR011009	-
	Rops2g03536	760	Gene3D	Phosphorylase Kinase; domain 1	409	518	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops2g03536	Rops-Chr2	65676321	65687961	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Rops2g03536	435	747	Receptor kinase-like Gene Family	AT4G11530	48.071	8.09e-102	326

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Rops2g03536		Glyco_hydro_18	1.4e-53	CL0058

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops2g03536	-		-	aprc:113847882	1226.85