Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03532 ATGGCTTCAAATCTCGTTGCTTTCATCTTTGTCATCCTTGTCTTCATCCCTCTGAAATCTCACTCTTTTGCAGATACACCTTCGTGGGTGAAAGCTGGTTATTACTATTCTGGCAGTGAAGTATCTGCTTCAGAGATAAAAGCCACGCTTTTCACTAACCTCTTCTGTGCTTTTGCTTTTATAAACACCACCAACTACAAGATCTTTATCAACTCTTCAGAGGAGCACATGTTCTCCACCTTCACCAACACAGTAAAGCACCAAAACCCATCTGTTTCAACGCTTCTATCCATCTGGGGTGGCAGAAAAGACTCTCCAGTTTTCACCTCAATGCTAAACCAATCTTCTTATAGGAAATCTTTCATTGATTCTTCAATCAAAGTAGCCAGGCAATATGGCTTTCAAGGCATAGACCTTTGTGGGGCCTGGCCAAGGCAGGGAAAGGACCTTGCCAATTTTGGAACCCTTTTGAAGGAGTGGCGAACTACAATAACCTCTGAGGCAAGAAACTCTAACAAGTCAGAGTTAATGTTGGTTATGGCAGGTTACTATCTTAAAGCTTCGGACTCCTTGAGTTACCCCTTTGAATCAATGCAGATGAACCTGGATTGGGTGCATTTTGTGGCATATGATTACTATATTCCTGGAAAGGACAATGTCACTGGTTTTCATGCTGCTCTATATGGTCCATCTGATTGGGATAACACTGATTCTGGTATCAAAGAGTGGAGGAGGAGAGGATTTTCCACAAGCAGGCTGCTAATTGGGTTGCCTTATCATGGATATGCATGGACTCTTGTGAACCCAGGAAACAAAGGCGTGGGAACACCAGCATCAGGACCTGCCATTACGATGGATGGTTTCATGGCTCATAAATTGATAAAGAGTTATATTAGAAGCTTTGGAGATGGAGTTATTTCAAATTATAATGCTACTTTTGTGGTGAATGACTTCACGGTTGCATCCACAACTTGGGTTAATTTTGACGATGTAGAAGCAATAAGGGTAAAAGTTTCTTATGCAAGGAAAAATGGGCTACTTGGTTACAATGTGTTCAAAGTGGGCAATGACGAAAATTGGGTCCTTTCAAGGGCAGCTTACAACTCTGACACCTGCACTTCTATTGGAATAATATTCTGCTTTTACCACCGAGGAAGAGTAGCCACTTATAAACTAAGAAGTTTATCAGAAGCTGAAAACGAACTCGATAGAAATGCTTCTGATCTGATAGTATTCAGTTACCTCACAATTAAAGTGGCAACAGATGACTTCTCAAAAGATAATAAGCTTGGAGAGGGGGGATTTGACACAGTGTACAAGGGAAAATTACGGAAGGGACAGGAAATAGCAGTAAAAAGACTATCAGAAACATCAAATCAAGGCCTTGAAGAATTCAAAAATGAGATCACGCTTACAGCAAGACTACAACATGTGAATTTAGTTAGACTTATGGGTTACTGCACAAAAAGGGATGAAAAGATTCTGATCTATGAATACCTGCCAAACAAAAGCTTAGATCATTTCCTATTTGATCATGAGATGAATCCCAAGATATCATATTTTGGTATGGCTAGAATTTTCAGGAAATATGAACTAGAAGCAAACACAAGTAGGATCGTGGGAACATATGGGTATGTACCTCCTGAGTATGTGAGAAAAGGCATATACTCAACAAAGTATGACGTTAATAGTTTTGGAGTTCTTCTCTTGCAAATCATAAGCGGAAAGAGGACTTCATGTTATTACGGCGTGCATGAATATATGAACCTTTTGGAATGTGCGTATGAGCTGTGGAAAGAAGACAGAGGTGTAGTGTTTGTTGACCCCTCATTGGATGATACAACATCACCTTGTAAAATCATGAGATGCATGGTGGCTCTGTTGTGTGTCCAAGAGAACTCTGCTGATAGACCTTCCATGTTAGAAGTTGATTCACTGCTCAAGAATGAAGCCGCAGCTATTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGCCTCCAAAATGTTAGTCCAAGTGTAGGCACAAATGTCATGCTACCCGCTGGCTGTGATCCCCCTGAAGTTGATGCACCTGGATTAGGAGCCAGTCCACGAGCTCTAATAAAAGGTGGTCTGACACAGTGA 2124 0.4143 MASNLVAFIFVILVFIPLKSHSFADTPSWVKAGYYYSGSEVSASEIKATLFTNLFCAFAFINTTNYKIFINSSEEHMFSTFTNTVKHQNPSVSTLLSIWGGRKDSPVFTSMLNQSSYRKSFIDSSIKVARQYGFQGIDLCGAWPRQGKDLANFGTLLKEWRTTITSEARNSNKSELMLVMAGYYLKASDSLSYPFESMQMNLDWVHFVAYDYYIPGKDNVTGFHAALYGPSDWDNTDSGIKEWRRRGFSTSRLLIGLPYHGYAWTLVNPGNKGVGTPASGPAITMDGFMAHKLIKSYIRSFGDGVISNYNATFVVNDFTVASTTWVNFDDVEAIRVKVSYARKNGLLGYNVFKVGNDENWVLSRAAYNSDTCTSIGIIFCFYHRGRVATYKLRSLSEAENELDRNASDLIVFSYLTIKVATDDFSKDNKLGEGGFDTVYKGKLRKGQEIAVKRLSETSNQGLEEFKNEITLTARLQHVNLVRLMGYCTKRDEKILIYEYLPNKSLDHFLFDHEMNPKISYFGMARIFRKYELEANTSRIVGTYGYVPPEYVRKGIYSTKYDVNSFGVLLLQIISGKRTSCYYGVHEYMNLLECAYELWKEDRGVVFVDPSLDDTTSPCKIMRCMVALLCVQENSADRPSMLEVDSLLKNEAAAIGGGGGGGGGGGLQNVSPSVGTNVMLPAGCDPPEVDAPGLGASPRALIKGGLTQ* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03532 707 SUPERFAMILY (Trans)glycosidases 32 358 IPR017853 -
Rops2g03532 707 CDD GH18_plant_chitinase_class_V 27 363 - -
Rops2g03532 707 Gene3D Transferase(Phosphotransferase) domain 1 497 651 - -
Rops2g03532 707 ProSiteProfiles Protein kinase domain profile. 424 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03532 707 Pfam Glycosyl hydrolases family 18 34 357 IPR001223 GO:0005975
Rops2g03532 707 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 29 373 IPR001223 GO:0005975
Rops2g03532 707 Gene3D - 259 328 IPR029070 -
Rops2g03532 707 FunFam Uncharacterized protein 399 499 - -
Rops2g03532 707 SMART 2g34 29 357 IPR011583 GO:0008061
Rops2g03532 707 Gene3D Phosphorylase Kinase; domain 1 397 496 - -
Rops2g03532 707 SUPERFAMILY Protein kinase-like (PK-like) 404 647 IPR011009 -
Rops2g03532 707 Pfam Protein tyrosine and serine/threonine kinase 426 512 IPR001245 GO:0004672|GO:0006468
Rops2g03532 707 Gene3D Glycosidases 44 358 - -
Rops2g03532 707 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 377 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03532 Rops-Chr2 65544037 65551227 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03532 2 366 Glycoside Hydrolase AT4G19810 42.623 2.17e-92 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops2g03532 Glyco_hydro_18 4.3e-51 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03532 - - aprc:113847882 1034.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03532 2 65544037 65551227 Rops2g03532 2 65544037 65551227 ECH