Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03527 ATGAGGCCAAAGATATCAGACTTTGGGATGACAAGAATATTCACAAAAGATGAACAAGAAGGCAACATTAGCAAGATTGTGGGAACATATGGCTATGTTCCACCTGAATATGTTAAACAAGGTGTGTATTCCACTAAATATGATGTCTATAGTTTTGGAGTGCTACTTTCACAAATTATAAGTGGCAAGAAGACAGGTGGCTTTTATGGAGACGACGAAGATTTAAAGCTCTTAGACTATGCTTATGAGTTATGGAAAGAAGGAAAGGGTATGGAGTTTGTGGATCTTTTACTTGATGACACATCTTCACCATGCAAGCTAATGAGATGCTTGCAAATTGCTTTGTTATGTGTCCAAGAACATGCAAATGATAGGCCTTCCATGCTTGAAGTTTCTTCAATGCTGAGAAATGAAAATAACTATCTAGCTATCCCCAAAAAGCTGGCATTTTCAAAAGTGAAAGACAATGAAAAAGTAAATGAGTGTCAACCCATAGAAATTATTTCAGTCAATGATACAACAATCACTGAAATGGTAGGTAGATAG 546 0.3626 MRPKISDFGMTRIFTKDEQEGNISKIVGTYGYVPPEYVKQGVYSTKYDVYSFGVLLSQIISGKKTGGFYGDDEDLKLLDYAYELWKEGKGMEFVDLLLDDTSSPCKLMRCLQIALLCVQEHANDRPSMLEVSSMLRNENNYLAIPKKLAFSKVKDNEKVNECQPIEIISVNDTTITEMVGR* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03527 181 ProSiteProfiles Protein kinase domain profile. 1 142 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03527 181 Pfam Protein tyrosine and serine/threonine kinase 4 134 IPR001245 GO:0004672|GO:0006468
Rops2g03527 181 Gene3D Transferase(Phosphotransferase) domain 1 1 157 - -
Rops2g03527 181 SUPERFAMILY Protein kinase-like (PK-like) 2 158 IPR011009 -
Rops2g03527 181 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03527 Rops-Chr2 65446099 65446856 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03527 1 181 Receptor kinase-like Gene Family AT4G23280 40.323 1.95e-42 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops2g03527 PK_Tyr_Ser-Thr 6.8e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03527 - - vun:114175226 275.018