Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03519 ATGGTCACGGAGTTGATGACCCTTGTCGATTCTGTCCCTATCCACTACGGGGAGTCTGACTTGTGGTGGTGGGCTTATGAATCATCGGGGAGGTTCTCGTGTAGCTCTGCATACCAAGTACTGATGGAACCTGCGGATAATTTACAGAACTATGAACCTGCCCCTCATGCTACAGCTTTGAGCTGTCCAGGTGGCTGCTCTTATTTGGGGACTGCTGTGGAGAGTTTGTGCCTGGATGTTAGGTTGCTGACTTTGCAAATTTTGATTGGAAGGAGTGAGGTTGGGTTCCCTGGTTTTGGCGGAGTCCTAAGCGGTTTTGGCTGAACGGTTAATGCCGCAAAATATTCAAGGTCTGAAGAGAGGAAAAAAGTTGCCGAACCTTTTCATGGGGATGCTCCTGATTTGCATGTCTATAGTTTTTTGGACATTGAAACGGCTACAAATATATTTTCATCTGAAAATAAGCTTGGACAAGGTGGTTATGGTCCTGTTTACAAGGGCATCCTATCCGATGGTCAGGAAATAGCCGTAAAAAAATTATCAAAAGCTTCTACACAAGGATATGAGGAATTCAAAAATGAGGTAGCACTTATCGCAAGGCTACAACATGTGAATCTTGTCCGATTGTTAGGATTTTGCATTGAAAGAGAGGAGCACATGCTAGTGTACGAGTACATGGCAAATAAAAGCTTGGACTTCTACCTTTTTGATCCTATTAGACGACTTTTGTTAGATTGGAACAAGCGTGTTGGCATCATTGAAGGAGTTACACAGGGTCTTCTTTATCTTCAAGAATATTCTAGATACACCATAATTCACAGAGACTTGAAAGCTAGCAATATTTTATTAGACACTGAGATGAGACCAAAGATATCAGACTTTGGGATGGCAAGAATATTCTCAAAAAATGAACAAGAAGCAAACACTAGCAAGATTGTAGGAACATATGGTTATGTTCCTCCTGAATACGTTAAGCAAGGTGTGTACTCCACTAAATTCGATGTCTATAGTTTTGGAGTCTGTCTTCTACAAATTATAAGTGGCAAGAAGATAGCTGGCTATTATGGAGAGAACGAAAATTTAAAGCTCTTGGACTATGCTTATGAGTTATGGAAAGAAGGAAGGGGTATAGAGTTTGTGGATCATTCACTTGATGACACATCTTCATCATGCAAGCTAATGAAATGCATGCAAATTGCTTTGTTATGTGTCCAAGAACATGCAAATGATAGGCCTTCCATGCTAGAAATTTCTTCAATGTTGAGAAATGAAAATAACACTCCAGCCATCCCCAGAAAGCCTGCATTTTCAACAGTGAATGATGAGGAAGAAGTAAATGAGTGTCAACCCCTAGAAATTGCTTCAGTTAATACTACAACCATCACTAAAATGATGGGCAGATAG 1404 0.406 MVTELMTLVDSVPIHYGESDLWWWAYESSGRFSCSSAYQVLMEPADNLQNYEPAPHATALSCPGGCSYLGTAVESLCLDVRLLTLQILIGRSEVGFPGFGGVLSGFG*TVNAAKYSRSEERKKVAEPFHGDAPDLHVYSFLDIETATNIFSSENKLGQGGYGPVYKGILSDGQEIAVKKLSKASTQGYEEFKNEVALIARLQHVNLVRLLGFCIEREEHMLVYEYMANKSLDFYLFDPIRRLLLDWNKRVGIIEGVTQGLLYLQEYSRYTIIHRDLKASNILLDTEMRPKISDFGMARIFSKNEQEANTSKIVGTYGYVPPEYVKQGVYSTKFDVYSFGVCLLQIISGKKIAGYYGENENLKLLDYAYELWKEGRGIEFVDHSLDDTSSSCKLMKCMQIALLCVQEHANDRPSMLEISSMLRNENNTPAIPRKPAFSTVNDEEEVNECQPLEIASVNTTTITKMMGR* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03519 466 ProSitePatterns Serine/Threonine protein kinases active-site signature. 270 282 IPR008271 GO:0004672|GO:0006468
Rops2g03519 466 SMART serkin_6 149 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03519 466 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 119 462 - -
Rops2g03519 466 SUPERFAMILY Protein kinase-like (PK-like) 133 447 IPR011009 -
Rops2g03519 466 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 112 224 - -
Rops2g03519 466 FunFam Uncharacterized protein 225 431 - -
Rops2g03519 466 Gene3D Transferase(Phosphotransferase) domain 1 225 436 - -
Rops2g03519 466 Pfam Protein kinase domain 150 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03519 466 Gene3D Phosphorylase Kinase; domain 1 108 224 - -
Rops2g03519 466 ProSiteProfiles Protein kinase domain profile. 149 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03519 Rops-Chr2 65273093 65279854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03519 137 466 Receptor kinase-like Gene Family AT4G11530 50.742 8.89e-112 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops2g03519 Pkinase 1.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03519 - - vun:114175226 548.51