Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03514 ATGGTTGGGGAAAACTCTTTAGTGGGTGAAGATGTGGCTGGAAATCTTTTTCCCGTGGGTATGCGAGTTTTGGCTGTGGATGATGACCAGACTTGTCTCAAAATGTTGGAGAATCTGCTTCGCAAATGCCAGTATCATGTTACTACAACTACTCAGTCAATTAAGGCGCTAGAACTGTTGAGGAAAAATAGAAATATGTTTGACCTTGTTATTAGTGATGTCAAAATGCCAGGCATTGATGGATTTAAGCTACTTGAGCAAGTCGGACACATGGACCTACCTGTCATCATGTTGTCAGGTTATGGTGATAAAGAGCTGGTGATGAAAGGTGTTATACAAGGCGCATGTGATTATTTAATAAAACCAGTTCGCATTGAAGAGTTGCGGAATATATGGCAACACGTAATGCGAAAAAAGATGGAATGCAAGGATCAGAATAAGGCCTCTAATGAGGAAAATAAAAATATTGGTCTAAAAAATAAGGCACAAAGTGAGGAGAAGGAAGAAGATTATGGAGAGACTGGACAAGAGAATCAGGAATCTTCAACTCAGAAGAAGCCTCGTTTAGTTTGGTCAACTGAGTTGCATAAGAAATTTGTTGCAGCAGTTAGTCAACTGGGACTTGACAAAGCTTACCCCAAGAGAATACTTGAATTGATGAATGTTGAAGGAATTACAAGGGAAAATGTAGCAAGTCATCTACAGAAATTCAGACTCAATCTGAAGAAGCCAACTCAACAGGCTGACATGGTTGCTGCATTGGGTAGTAGTGATCCTCACCAGCATATGGGTTCAGTAGATGGATATGAAGATTTTTGCACCCCATCTGGATCAAGAACAATCATAAGGTGCACACTACCATCCTATCATGCATCTGGCCTAATATCCCACAAGCTGATGAAATCCCCATCTTGCTTGAACTTGAGAGGAATCAGTTCTTCTGCACTTGTTCAACCTAATCAGTCTGGCTCTATAAAAACACTTGGAAACATCCCACTATCCAACTTTCCAAACCAGTTTCAGCAGAACAACTGTTCAGTTGGTATAGCTAATTCAAGTGGTTCATCTATAGTTCCTAAGTTACCCAACTTCCCTAACCAGTTTCAGCAGAACAACTGTCCAGTTGGTATAGCTAATTCAAGTGGTTCATCTATAGTTCCCAAGTTACCCAACTTCCCTAACCTGTTTCAGCAGAACAACTGTCCAGTTGGTATAGCTAATTCAAGTGGTTCATCTATAGTTCCCAAGTTACCCAACTTTCCTAACAGTTCTACTCCATTGAATGAGGTTTTAAATAATAGTTATATTGGAAAAAGTCCCATTGATTTTTCTTCCACAAGTTCTGTTGCTGTTCCTTTGAAGGATGCTAGAGGAGAGCTGCAATATCAAGAGGGCTTACTTGGAAATATCTGCATTTTGCCTGGAATGAAGACCCAAGAAGAATTCATTCAGGAAGACCAATTCACTCAGGATAGTTGGTCGTTTGATGACATAATGAATGAATTGGAAAAACAGGATCAAATGGGAAGATATTGA 1536 0.3984 MVGENSLVGEDVAGNLFPVGMRVLAVDDDQTCLKMLENLLRKCQYHVTTTTQSIKALELLRKNRNMFDLVISDVKMPGIDGFKLLEQVGHMDLPVIMLSGYGDKELVMKGVIQGACDYLIKPVRIEELRNIWQHVMRKKMECKDQNKASNEENKNIGLKNKAQSEEKEEDYGETGQENQESSTQKKPRLVWSTELHKKFVAAVSQLGLDKAYPKRILELMNVEGITRENVASHLQKFRLNLKKPTQQADMVAALGSSDPHQHMGSVDGYEDFCTPSGSRTIIRCTLPSYHASGLISHKLMKSPSCLNLRGISSSALVQPNQSGSIKTLGNIPLSNFPNQFQQNNCSVGIANSSGSSIVPKLPNFPNQFQQNNCPVGIANSSGSSIVPKLPNFPNLFQQNNCPVGIANSSGSSIVPKLPNFPNSSTPLNEVLNNSYIGKSPIDFSSTSSVAVPLKDARGELQYQEGLLGNICILPGMKTQEEFIQEDQFTQDSWSFDDIMNELEKQDQMGRY* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03514 511 MobiDBLite consensus disorder prediction 142 188 - -
Rops2g03514 511 NCBIfam myb-like DNA-binding domain, SHAQKYF class 186 240 IPR006447 GO:0003677
Rops2g03514 511 PANTHER TWO-COMPONENT RESPONSE REGULATOR 21 324 IPR045279 GO:0009736
Rops2g03514 511 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 183 242 IPR017930 -
Rops2g03514 511 SUPERFAMILY CheY-like 20 143 IPR011006 -
Rops2g03514 511 Coils Coil 148 168 - -
Rops2g03514 511 PIRSF RR_ARR_type-B 4 510 IPR017053 GO:0003677|GO:0003700|GO:0009736
Rops2g03514 511 Pfam Myb-like DNA-binding domain 190 236 IPR001005 -
Rops2g03514 511 SUPERFAMILY Homeodomain-like 183 243 IPR009057 -
Rops2g03514 511 FunFam Two-component response regulator 182 244 - -
Rops2g03514 511 Pfam Response regulator receiver domain 23 131 IPR001789 GO:0000160
Rops2g03514 511 CDD REC_typeB_ARR-like 23 135 - -
Rops2g03514 511 Gene3D - 20 157 - -
Rops2g03514 511 ProSiteProfiles Response regulatory domain profile. 22 136 IPR001789 GO:0000160
Rops2g03514 511 SMART REC_2 21 132 IPR001789 GO:0000160
Rops2g03514 511 Gene3D - 182 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03514 Rops-Chr2 65204769 65207937 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03514 17 407 Response Regulator Gene Family AT2G25180 46.763 1.55e-99 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Rops2g03514 Response_reg 4.9e-23 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03514 K14491 - gmx:100776075 466.463