Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03500 ATGGGTCTCTGCACTTCAAAACCTCTCTCTTCTCCCAATTCAGGTACCCATTCACCTGCCATAGAAACCATAGATATAGACACAAACACCACTTCCAACTCTAATGCTAGTTCCAAGCCTCATTCCAATGGAGAAAACCCTACCTTTACACCTACCCGTGTTAAAAAATCTCCCTTTTTTCCATTTTACAGTCCTAGTCCGGCGCATCATTTGTTTTCCGGCAAGTCTCCGGCGCCGGGAACTCCGAGGAGGTTCTTCAAGCCACCGTCGCCGGCGAAGCACATAAGGTCTGTGCTGGCTCGCCGTCATGGATCCGTTAAGCCCAACGAAGCTACCATACCTGAAGGGAGTGAAGCTGAGGTGGTTGCTTTGGATAAGAATTTTGGGTTCTCTAAGCATTTTTTGCAAAAGTACCAGCTTGGTGAAGAAGTTGGGAGAGGGCACTTTGGTTACACTTGTGCTGCTAAGTTTAACAAAGGTGAACTTAAGGGTCATAAGGTTGCTGTTAAGGTCATCCCAAAAGCAAAGATGACCACTGCCATTGCTATTGAGGATGTGAGAAGGGAAGTGAAAATGTTGAGAGCTTTGACTGGACACAAAAATCTAATACAATTCTACGATGCATATGAAGACCATGATAATGTCTATATAGTAATGGAGTTGTGCGAAGGAGGGGAGCTTTTGGATAGAATACTATCAAGGGGAGGGAAATACACAGAGGAAGATGCAAAAGCTGTCATGACACAAATACTGAATGTTGTTGCATTTTGCCATCTACAGGGTGTTGTTCATCGTGATCTTAAACCTGAGAACTTCTTGTTCACATCCAAAGATGAGAACTCAGAGCTGAAGGCCATAGACTTTGGGTTGTCAGATTTTGTTAAACCAGATGAAAGGCTTAATGATATTGTTGGTAGTGCATACTATGTGGCTCCTGAAGTTCTGCATAGAGCTTACAGTACAGAGGCCGACGTCTGGAGTATTGGTGTGATTGCATATATTTTATTATGTGGCAGCCGTCCATTTTGGGCACGGACTGAATCAGGGATCTTTCGTGCTGTATTGAAGGCTGACCCAATTTTTGATGAACCTCCTTGGCCTTCTCTGTCAGATGAGGCAAAGGATTTTGTTAAGAGACTACTAAATAAAGATCCAAGGAAAAGAATGACCGCAGCACAGGCATTAGGTCATCCATGGATTAAAAATTATAGGGATGTAAAAGTACCTCTGGATATTCTAGTGTTCAAGCTCATGAAGGCATATATGCGTTCCTCCTCTCTAAGAAAAGCAGCTTTAAGGGCTCTGTCTAAGACGTTAGCTATTGATGAGCTGAATTATTTGAAGGAGCAATTTGCACTTTTAGAGCCAAACAAAAATGGCACCATTAGCTTGGAAAATATCAAAGTGGCCTTGATGAAGAATGCAACAGATGCTATGAAGGAGTCACGCATCCCTGATTTCCTGGCATCACTTAGTGCATTACAATATAGAAGGATGGATTTTGATGAGTTCTGTGCAGCTGCACTTAGTGTTCATCAACTTGAAGCACTTGACCGGTGGGAGCAACATGCACGCTGTGCCTATGAACTTTTTGAAAAAGATGGAAACAGGGCTATAGTCATCGAGGAACTAGCTTCGGAGCTTGGCCTTGGTCCATCTGTCCCTGTTCATGCTGTTCTTCATGACTGGATTAGACACACTGATGGAAAGTTAAGCTTCCTTGGATTTGTCAAATTGTTGCATGGTCCATCTCGAAGTCTTGTAAAACCTCAGTAG 1776 0.4324 MGLCTSKPLSSPNSGTHSPAIETIDIDTNTTSNSNASSKPHSNGENPTFTPTRVKKSPFFPFYSPSPAHHLFSGKSPAPGTPRRFFKPPSPAKHIRSVLARRHGSVKPNEATIPEGSEAEVVALDKNFGFSKHFLQKYQLGEEVGRGHFGYTCAAKFNKGELKGHKVAVKVIPKAKMTTAIAIEDVRREVKMLRALTGHKNLIQFYDAYEDHDNVYIVMELCEGGELLDRILSRGGKYTEEDAKAVMTQILNVVAFCHLQGVVHRDLKPENFLFTSKDENSELKAIDFGLSDFVKPDERLNDIVGSAYYVAPEVLHRAYSTEADVWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPIFDEPPWPSLSDEAKDFVKRLLNKDPRKRMTAAQALGHPWIKNYRDVKVPLDILVFKLMKAYMRSSSLRKAALRALSKTLAIDELNYLKEQFALLEPNKNGTISLENIKVALMKNATDAMKESRIPDFLASLSALQYRRMDFDEFCAAALSVHQLEALDRWEQHARCAYELFEKDGNRAIVIEELASELGLGPSVPVHAVLHDWIRHTDGKLSFLGFVKLLHGPSRSLVKPQ* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03500 591 FunFam CDPK-related kinase 1 131 226 - -
Rops2g03500 591 ProSiteProfiles Protein kinase domain profile. 138 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03500 591 ProSiteProfiles EF-hand calcium-binding domain profile. 442 477 IPR002048 GO:0005509
Rops2g03500 591 SUPERFAMILY Protein kinase-like (PK-like) 135 427 IPR011009 -
Rops2g03500 591 Gene3D Transferase(Phosphotransferase) domain 1 227 412 - -
Rops2g03500 591 SMART serkin_6 138 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03500 591 ProSitePatterns Serine/Threonine protein kinases active-site signature. 262 274 IPR008271 GO:0004672|GO:0006468
Rops2g03500 591 Gene3D - 418 509 - -
Rops2g03500 591 PANTHER SERINE/THREONINE-PROTEIN KINASE 124 566 - -
Rops2g03500 591 MobiDBLite consensus disorder prediction 1 51 - -
Rops2g03500 591 Pfam Protein kinase domain 138 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03500 591 CDD STKc_CAMK 137 399 - -
Rops2g03500 591 FunFam CDPK-related kinase 1 437 509 - -
Rops2g03500 591 FunFam CDPK-related kinase 3 130 302 - -
Rops2g03500 591 Gene3D Phosphorylase Kinase; domain 1 131 226 - -
Rops2g03500 591 SUPERFAMILY EF-hand 431 581 IPR011992 -
Rops2g03500 591 ProSitePatterns Protein kinases ATP-binding region signature. 144 170 IPR017441 GO:0005524
Rops2g03500 591 FunFam Calcium-dependent protein kinase SK5 310 404 - -
Rops2g03500 591 Gene3D - 425 579 - -
Rops2g03500 591 MobiDBLite consensus disorder prediction 71 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03500 Rops-Chr2 64658761 64663432 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03500 1 589 EF-hand Containing Proteins AT3G50530 75.314 0.0 943
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Rops2g03500 Pkinase 8.7e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03500 K00924 - gmx:100803313 995.342