Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03491 ATGTCATCATCAAACACACCATGCGCGGCCTGCAAATTTCTTCGCCAGAAATGCACACAGGAGTGCGATTTCGCACCGTACTTTCCACCCGATAACCCGCAACAGTTTGTGAGTGTGCACCGTGTGTTCGGTGCAAGCAACGTGAGAAAGATTCTGAAAGATCTTAACGCCGCGCAGCGTGACGAAGCCGTCAAGTCACTCGCATACGAGGCGGAAGCGCGTTTGAGAGACCCCGTTTACGGTTGTGTCGGGTTCATCTCCGTGTTGCAGCAACGCCTCAAGCAAATCCAAGCGGAGCTTCAGAACGCAAAGAAGGAACTATCCCAATACCTTAGCCCTCAGGCTATGCAGTACTTCTTGGCCAATCCCAATGCGTTTCTAATGGCACAGCACAACAACCTCCCACCACAGGGAAATCCTTTTTCCCTTTTTCCTAACTACCCCAACAACATCCCGCAACCACCGCCGGTTTTTGCGGGCCACGGTGGTGGACAGTTGGTTATTAGGGACCCAGAGCAGCAGGAGCTTCTAGAAGCTCAGCAATTGGCTGCTGCGGCTCGAGAGCATCAGCAACAAGAGTTGATGAGGTTCAATAGTGGGTTCGAGACTTTGGGTTCTGTTGCGGTTGGTGCTGGTTCTGGAACTGGTGGGTTCGGTTCCCCAGTTAATGTTCCTGCTGAGGTACAACCTTCATTGGCTTTGGGGACTTTTGAAAATGTTAACCCTTATCAGATTCAGCAAGGTGAACACCACCATATTCCTCACCACACTCACACTCCGATTGAGGCACAGCTTCTTCTCTCGCCGCAGCAACAGACACAGCAGTCACAGCAACAGCCACATCAGTCTGGAAGCGAGGATGGTAGGAGTGTCGGTCCTTCTTGTTGA 888 0.518 MSSSNTPCAACKFLRQKCTQECDFAPYFPPDNPQQFVSVHRVFGASNVRKILKDLNAAQRDEAVKSLAYEAEARLRDPVYGCVGFISVLQQRLKQIQAELQNAKKELSQYLSPQAMQYFLANPNAFLMAQHNNLPPQGNPFSLFPNYPNNIPQPPPVFAGHGGGQLVIRDPEQQELLEAQQLAAAAREHQQQELMRFNSGFETLGSVAVGAGSGTGGFGSPVNVPAEVQPSLALGTFENVNPYQIQQGEHHHIPHHTHTPIEAQLLLSPQQQTQQSQQQPHQSGSEDGRSVGPSC* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03491 295 Coils Coil 86 106 - -
Rops2g03491 295 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 260 - -
Rops2g03491 295 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Rops2g03491 295 MobiDBLite consensus disorder prediction 269 295 - -
Rops2g03491 295 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03491 Rops-Chr2 64503899 64504786 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03491 4 277 AS2 family AT2G23660 42.173 6.49e-59 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Rops2g03491 LOB 1.5e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03491 - - dzi:111292419 256.529