Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03486 ATGGAGCTGAGCTTGGATTTGAGTTTGGCCTTTGTCCCCAGAACCATTTCTGAGTTTCTTGGAGATGTTTCTCAGAACAAAGATGGGTCTCAGAAAATGACCATATTTGAGGACTTAATCAAAAGGTTGGAAGATGAGAAGAGGAAGATCGAGGCCTTCAAACGTGAGCTTCCTCTTTGCATGATCCTCGTAAAAGATGCTATAACTAGATTGAAGGAGGAAATAAACGGGTGTACGAGAATGCAAGATAAACCCGTGGTTGAAGAATTGATGCCACTGATGAATACCAATTCTGAAGGAAATAGTGACAAGAAGTATTGGATGAGCTCTGCTCAGTTATCGAGCGCTGAAACCGATTTGTGGCAGAGGAAGGGAGAGGATGATCATAGGTCTGTGCCTCACAACTCAATTCAACCATGGAACGAGACCAACAAGAGTGGAGGGGCTTTTTTAGCATTCAATGGAAACTCGTGTGTTTCAAAGACAGTGATAAGGGATGACAAGGAGGTTTCAAAGGTTTCTAGCTTTGGTTTGATGGCTCCAACCTTTGAACTAAATCATAGAAATCCCAGAAGCCCGGTTGAGATTAAGGGTCAACCACTAGAGCCGCAAGATCAGAGGAAACAGAGGAGATGCTGGTCTCCAGAGCTTCATCGGCGATTTGTTGATGCCCTTCAACGATTGGGAGGACCACAAGTGGCCACACCTAAGCAGATCAGAGAACTGATGCAGGTGGAAGGCCTGACAAATGATGAAGTGAAAAGCCATTTGCAAAAGTACAGGCTTCATTTTAGAAGAATTTCAGTTCCACCAGTTGGCCAGGCAAATAAACGTGAATCAAAGGGAAACTTAACACAATCTGTCTCTCCACAAGGTCCTCTCTTCCTAGGAGGGTCTACTAAAGGCTTTTCAAGCTCTGGACTCAACAGTATGGACACAGAAGAAGATGAGCAATCAGATTGTCACAGTTGGAAAGGTGGGAGTCACCAGCAACCAGAAGCTGGCATATTGTGA 1014 0.4448 MELSLDLSLAFVPRTISEFLGDVSQNKDGSQKMTIFEDLIKRLEDEKRKIEAFKRELPLCMILVKDAITRLKEEINGCTRMQDKPVVEELMPLMNTNSEGNSDKKYWMSSAQLSSAETDLWQRKGEDDHRSVPHNSIQPWNETNKSGGAFLAFNGNSCVSKTVIRDDKEVSKVSSFGLMAPTFELNHRNPRSPVEIKGQPLEPQDQRKQRRCWSPELHRRFVDALQRLGGPQVATPKQIRELMQVEGLTNDEVKSHLQKYRLHFRRISVPPVGQANKRESKGNLTQSVSPQGPLFLGGSTKGFSSSGLNSMDTEEDEQSDCHSWKGGSHQQPEAGIL* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03486 337 MobiDBLite consensus disorder prediction 271 337 - -
Rops2g03486 337 Pfam Myb-like DNA-binding domain 210 261 IPR001005 -
Rops2g03486 337 FunFam Myb family transcription factor 207 265 - -
Rops2g03486 337 MobiDBLite consensus disorder prediction 187 210 - -
Rops2g03486 337 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 8 325 IPR044787 GO:0003700|GO:0006355
Rops2g03486 337 MobiDBLite consensus disorder prediction 278 312 - -
Rops2g03486 337 NCBIfam myb-like DNA-binding domain, SHAQKYF class 208 263 IPR006447 GO:0003677
Rops2g03486 337 SUPERFAMILY Homeodomain-like 206 266 IPR009057 -
Rops2g03486 337 Gene3D - 207 265 - -
Rops2g03486 337 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 205 265 IPR017930 -
Rops2g03486 337 Coils Coil 36 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03486 Rops-Chr2 64267089 64269083 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03486 1 264 G2-like Transcription Factor Family AT4G37180 41.241 1.96e-52 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Rops2g03486 Myb_DNA-binding 1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03486 - - lang:109332341 355.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03486 2 64267089 64269083 Rops2g03486 2 64267089 64269083 ECH
Rops2g03486 2 64267089 64269083 Rops1g01750 1 36322776 36324720 PCT