Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03483 ATGGATCGGGCCGCGTTGATGGTTGGACCGGACATGGTCATGCCGATCATGCACGATAGCGACCGTTACGAACTGGTCCGTGATATCGGGTCGGGAAATTTCGGCGTGGCGAGGTTGATGCAGGATAAACACACCAAGGAGCTTGTTGCCGTTAAGTATATCGAACGTGGTAATAAGATTGATGAAAATGTTAAAAGAGAAATCATTAATCACAGGTCTTTGAGACACCCTAACATTGTTAGGTTCAAGGAGGTCATTTTAACACCTACTCATTTGGCCATTGTAATGGAGTATGCATCTGGAGGAGAACTTTTCAACCAAATCTGCAGCGCTGGGCGTTTTACCGAGGACAAGGCTCGTTTCTTCTTTCAACAACTCATATCTGGGGTCAGCTATTGCCATGCTATGCAAGTATGTCACCGGGACCTGAAGTTGGAAAACACTTTGTTGGATGGAAGCCCAACGCCTCGATTGAAGATATGTGATTTTGGGTACTCCAAGTCTTCAGTGCTTCATTCACAACCGAAGTCAACTGTGGGAACTCCTGCATACATTGCTCCCGAAGTATTGCTGAGAAAAGAGTATGATGGCCAGATTGCAGATGTCTGGTCATGTGGAGTAACCTTATATGTGATGCTAGTGGGCTCATATCCTTTTGAAGATCCTACTGAACCAAAGGATTTCCGGAAGACAATTCAGAGAGTTCTGAGTGTACAGTATTCCATTCCAGACTTTGTTCAAATATCTCCAGAGTGTCACCGCCTTATCTCAAGGATCTTTGTTTTTGATCCTGCAGAGAGAATCACCATGCGTGAGATCTGGAACCATGAATGGTTTCTGAAGAATCTCCCTGCTGACCTGATGGATGAGAAGATAATAAGTAACCAATTTGAAGAGCCAGACCAACCCATGCAGAGCATTGATGCGATCATGCAAATACTTTCAGAAGCTACCTTACCAGCAGCTGGGACTTCCTATTCTTTAGACCACATTATGGATAGCATCGATATGGATGAAGACATTGATGAATTAGAATATGAATCTGAGCTTGAAATAGATAGCAGTGGGGAGATAGTGTATGCCATATACTAA 1092 0.4386 MDRAALMVGPDMVMPIMHDSDRYELVRDIGSGNFGVARLMQDKHTKELVAVKYIERGNKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFNQICSAGRFTEDKARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPTPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRKEYDGQIADVWSCGVTLYVMLVGSYPFEDPTEPKDFRKTIQRVLSVQYSIPDFVQISPECHRLISRIFVFDPAERITMREIWNHEWFLKNLPADLMDEKIISNQFEEPDQPMQSIDAIMQILSEATLPAAGTSYSLDHIMDSIDMDEDIDELEYESELEIDSSGEIVYAIY* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03483 363 ProSiteProfiles Protein kinase domain profile. 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03483 363 FunFam Serine/threonine-protein kinase SRK2E 13 98 - -
Rops2g03483 363 FunFam Serine/threonine-protein kinase SRK2E 99 287 - -
Rops2g03483 363 PANTHER SERINE/THREONINE KINASE 22 311 - -
Rops2g03483 363 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Rops2g03483 363 SUPERFAMILY Protein kinase-like (PK-like) 14 317 IPR011009 -
Rops2g03483 363 Gene3D Phosphorylase Kinase; domain 1 1 98 - -
Rops2g03483 363 SMART serkin_6 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03483 363 Pfam Protein kinase domain 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03483 363 CDD STKc_SnRK2 22 278 - -
Rops2g03483 363 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Rops2g03483 363 Gene3D Transferase(Phosphotransferase) domain 1 99 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03483 Rops-Chr2 64188496 64193056 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03483 22 309 CBL-interacting serine-threonine protein kinases AT4G24400 40.728 8.75e-67 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Rops2g03483 Pkinase 1.2e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03483 K14498 - gmx:100806949 630.943