Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03479 ATGGGAGAGACGACACCACTTGTTGTTCTTCCAACACTATTTCAAGAGAACTTGAAGAAGATCTCGCAAATAGTGAAGAAAGCTCGAAGGAGCAAAAGTACAAGGCGAATCCTGAGGTCAACGCTCAAGGATTTGACTCCTCTTGTTCAAGAGATCAAGCGATACAATGAACACTTGGATCCACCCAGAGAAGAAATTAACACTCTCGTCAAAGAAAACTCTGAAGCGGAGAAAGAAGAGCTTGTGTGCTACAAAAAATGCTTCTCCAAGAATATTTGGTCGATGTGGGACAAGTATCTCTCTTGGCTTTCGCGTAATAGGGATGATTCCTTTGTTGCTGATGACAAACAAGCTATTACGGCAAAGGATGTTAAGGAAACGCTTTATAAGGTGAAAGAAATTATTGAGCTACTTAACAAAAAGAATTTTGAGCTGAAATTTAGTGGAACTGGAGCACCAATCAAGCGTCCTTTTGGTGTTCCTGCAAACCCAGAATTCACTGTTGGGTTGGATGAACCGTTGGCCAAGTTGAAGATGGAGCTTCTCATGGATGGTGTGTCCACCCTTTTGTTGACTGGTTTGGGAGGATCGGGGAAAACCACTTTGGCTACAAAGCTCTGTTGGGATGAAAAAGTTAAGGGTAAATTTGGGGAAAATATTATATTTGTCACCTTTTCAAAAACGCCAAATTTGAAGATTATTACAGAGAGACTATTTGAACACTGTGGATATCCAGTGCCTGTGTTTCAAAGCGATGAAGATGCAGTTAATCAGTTGGGACTTTTGCTGACGAAGGTTGAGGGAAGTCCAATATTGTTGGTCCTTGATGATGTTTGGCCTGGCTCAGAAGGCCTTGTTGAAAAATTTAAGTTCCAGCTATCAGATTATAAAATTTTGGTGACTTCAAGGGTTGCATTTCCAAGATTTGGCACAACATTCACCTTAAAACCTCTTGTTCATGATGATGCAGTAGTCCTTTTCCATCATTATGCCCTCTTGGATAAAAGCAGTCCAAATATTCCTGATGAAGTTCTCATACAAAAGGTTGTGGAGAATTGCAAGGGTTTACCGCTTGCCATTAAAGTAATTGGTACATCACTTAGTTGTAGGCCTCATGAGTTGTGGCAAAAGACAGTAAAGGAACTGTCTCAAGGTCACTCAATACTTGATTCTAATACTGAATTACTTACTCGCCTCCAAAAGATCTTAGATGTTTTAGAAGATAATTCCGTCATCAAGGAGTGCTTCATGGACCTTGCGTTATTCCCTGAAGACCAAAGAATTGCAGCTGCAGCTCTCATTGATATGTGGGCAGAGTTGTATGGACTTGATGATGAGGGCATAAAAGCAATGGACATCATCAACAAATTAGACTCCATGAATTTGGCTAATGTCTTAATAGCAAGGAAAAACGCAAGTGACACAGACAATTACAACTACAACAACCACTTCATCGTCCTTCATGATCTTCTAAGAGAGCTTGGAATTTATCAAAGCACCCAGGAACCAGTTGAACAGAGAAAAAGACTGATTATTGACATGAATGAAAATAAACGTGAATGGAGGCTTGGGGAGAAGCAGCAAGGCATGATGGCCCGCATATTGTCAAAATTTCTGAGATGGTGTGTTAATCAGAACCCCCAACAGGTCCCTGCCCGCACATTGTCTTTATTAACTGATGAAACGTGCTCTTCAGATTGGTCCCAAGTTCAATCAGCTCAAGCTGAGGTTCTGATTTTAAATCTTCAAACCAAGCAGTATTTCATTCCACAGTTTATAGAGGAAATGAGTAAACTAAAAGTTCTGATAGTCACAAATTATGGTTTCCATCCTTCTGAACTGAGCAATTTTGAGCTACTCAGCTCTTTATCCCTCCTGAAGAGAATCAGACTAGAGCGGATTTCTGTTCCTTCCTTTGGCAAATTGAAGAATCTAAAAAAATTATCCCTCTACATGTGTAATACAAGACTGGCATTTGAAAAGGGTAGCATCCTAATTTCAGATGCATTTCCAAATCTAGTAGAATTGAACATTGACTATTGCAAGGATATGGTGAGATTACCTACTGGTCTCTGTGATATCACCCCCTTAAAGAAGCTCAGCATTACCAATTGCCATAAGCTTTCTGCACTGCCCCAAGAAATTGGAAAATTGGAGAATTTGGAACTCCTGAGGCTGAGTTCCTGTACTGATTTAGAAGGGATACCAGATTCTATTGGAAGGCTTTCAAATCTAAAACTTCTAGACCTCTCAAACTGCATAAGCCTTCTAACTTTACCGGAGGAAATTGGTAATCTGTGTAATCTAAGAAATCTCTACATGACAAGTTGTGCAAATTGTGAATTGCCATCCTCAGTCATCAATCTTGAGAATTTAAAGGTGACATGCGATGAAGAGACGGCTGTTTCATGGGAAGCTTTCGAACCTATGATTCCAAATCTAAAGATAGAGAGGAAAAGCTTCAATGTTTTGGATCCTAAGGTGATGGAGTGTTTTTGGGATCTAGGCTTATTTCCTGAAGACCAGAGGATCCCTGCATCTGCCCTCGTTAATAAGTGGGCAGAACTGCATGATGGAAGTTGA 2583 0.4026 MGETTPLVVLPTLFQENLKKISQIVKKARRSKSTRRILRSTLKDLTPLVQEIKRYNEHLDPPREEINTLVKENSEAEKEELVCYKKCFSKNIWSMWDKYLSWLSRNRDDSFVADDKQAITAKDVKETLYKVKEIIELLNKKNFELKFSGTGAPIKRPFGVPANPEFTVGLDEPLAKLKMELLMDGVSTLLLTGLGGSGKTTLATKLCWDEKVKGKFGENIIFVTFSKTPNLKIITERLFEHCGYPVPVFQSDEDAVNQLGLLLTKVEGSPILLVLDDVWPGSEGLVEKFKFQLSDYKILVTSRVAFPRFGTTFTLKPLVHDDAVVLFHHYALLDKSSPNIPDEVLIQKVVENCKGLPLAIKVIGTSLSCRPHELWQKTVKELSQGHSILDSNTELLTRLQKILDVLEDNSVIKECFMDLALFPEDQRIAAAALIDMWAELYGLDDEGIKAMDIINKLDSMNLANVLIARKNASDTDNYNYNNHFIVLHDLLRELGIYQSTQEPVEQRKRLIIDMNENKREWRLGEKQQGMMARILSKFLRWCVNQNPQQVPARTLSLLTDETCSSDWSQVQSAQAEVLILNLQTKQYFIPQFIEEMSKLKVLIVTNYGFHPSELSNFELLSSLSLLKRIRLERISVPSFGKLKNLKKLSLYMCNTRLAFEKGSILISDAFPNLVELNIDYCKDMVRLPTGLCDITPLKKLSITNCHKLSALPQEIGKLENLELLRLSSCTDLEGIPDSIGRLSNLKLLDLSNCISLLTLPEEIGNLCNLRNLYMTSCANCELPSSVINLENLKVTCDEETAVSWEAFEPMIPNLKIERKSFNVLDPKVMECFWDLGLFPEDQRIPASALVNKWAELHDGS* 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03479 860 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 419 IPR027417 -
Rops2g03479 860 Pfam NB-ARC domain 173 394 IPR002182 GO:0043531
Rops2g03479 860 PRINTS Disease resistance protein signature 353 367 - -
Rops2g03479 860 PRINTS Disease resistance protein signature 740 756 - -
Rops2g03479 860 PRINTS Disease resistance protein signature 265 279 - -
Rops2g03479 860 PRINTS Disease resistance protein signature 188 203 - -
Rops2g03479 860 SUPERFAMILY RNI-like 584 793 - -
Rops2g03479 860 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 12 135 IPR008808 -
Rops2g03479 860 Coils Coil 389 409 - -
Rops2g03479 860 Gene3D - 818 858 IPR036388 -
Rops2g03479 860 Gene3D - 401 495 IPR036388 -
Rops2g03479 860 Gene3D Ribonuclease Inhibitor 540 804 IPR032675 -
Rops2g03479 860 Gene3D - 153 306 IPR027417 -
Rops2g03479 860 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 8 817 IPR039203 GO:0050832
Rops2g03479 860 Gene3D - 318 400 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03479 Rops-Chr2 64074937 64079208 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03479 635 803 WRKY Transcription Factor Family AT4G12020 31.868 2.17e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03479 - - gmx:112997603 1085.48