Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03467 ATGCAAGCTCAGAATACCAGGAATGGGTTGGAGACCCTGGTGGAACTTAAAGAGTTTCATGCGGAATTCAGAAGAAACCAAAGGACTGAATTAAGGAACGTGTGCTCGCCTCCTGAACCCCCTGCCTTGACTTTTGGCTTTGATGATCCTCTAAATGAGTTGAAGCTCAAGTTGCTCCAGGACCAGGTTAGTGTCTCCGTGCTCACGGTCACCGGCTCAGGAGGTTCGGGAAAGACTACATTAGCCAAAATGTTTTGTTCGGATGTCCAAGTCAAAGGTAAATTCAAGGATAATGTCTTCTTCGTCACCTTTGGACGAACACCCAAGTTGAGTACCATAGTGCAGAAACTGTACCAACACACTGGTTTCCATGTGCCTGGGTTTCAAGGTGATGAAGATGCTGTTAACCAATTGGAACATTTGCTAAAACAGATTGGAAAGAGCCCGATACTGTTGGTCCTGGATGATATTTGGCCAGGATCGGAATCTCTTGTTGACAATTTTGTGTTCGAGATCCCCAACTACAAGATTTTGGTGACATCAAGATCCGCAAATACACGATTTGGTGCTCTATACGTCTTAAAACCCCTTGATGAAGCAAATGCTATAAATCTATTTCGCCATTCAGCATCCCTGAATCAGAGCAACTCTAATATTCCTAATGATGATGTAAAAAAGATAGTGAGAGGCTGCAGTGGTTCTCCCTTGGCACTAACAGTGACTGGCAGATCACTACGTCAGCAGCATCCCGTGGTTTGGCACAAAATGGCGAGGGAATTATCCGCGGGTCATTCAATTCTTGATTCTAACAGTGATGTGCTTGCTTGTCTCCAAAAAAGCTTAGATGTATTGGATTCTAAGGCCATAGAGTGTTTTTATGACCTTGGCTTATTTCCTGAAGACCAGAGGATCCCTGCTTCTGCGCTCGTTGATATGTGGGCAGAACTGCATAATGAAGATGATGCGAATGCAATGGTCAAAATTTATAAACTGGTCAACCTAAACATGGCTGATATTGTTGTCACAAGGGAAGTTGCAAGTGAAACGGTTGACTACAATTTTCACTATGTCAAACAGTATGATCTTCTTCGGGAGCTAGCTATACGTGAAACTAGCCACGAGCCCGTGGACAAGAGGAATCGACTACTTATTGACATAAGTGGAAATAATCTTCCCTCATGGTGGAACTTAGAGAAAGAGTATCACATTGCAGCCCGCCTATTATCCATATCAACTGATGAAGCACTAACTTCAGAATGGTGCAACTTGCAGCCAAATGAAGTTGAGGTTCTAGTGCTGAACCTACGAGAAAAGAAGTACACACTACCAACGTTCATTAAGAAAATGAATAAATTAAAAGTTTTGTTAATCACAAATTATGACTTTTATCCTGCTGAATTGGAGAATTTCGAGCTGCTTGATCATCTATCTCATCTTAAACGAATCAGATTAGAGAAGGTTTCAATTCCTTCTCTCACCAAGACCGGAGTGCAATTGAAGAATCTGCACAAGTTTTCTCTTTTTATGTGTAATGTGAATGAAGCTTTTAAAAATTGCGCTATGCCAAATTTGATGGAGATGAATATTGACTACTGCGGCAATATGGTGGAATTGCCAGTTGTGCTCTCTAATATCGTTCTCTTAAAGAAGCTCAGCATTACAAATTGCCACAATCTTGCTGCACTTCCTGAAGGAATTGGAATGTTGGTCAATTTGGAATCACTAAGGCTTAGTTCCTGCACTGCTTTAGCAGAGTTGCCAGACTCAATCACAAGCCTTCAAAACCTGAAATTTCTTGACATCTCTGACTGCATAAACATTAGTATGTTACCTGAGGACATGGGCAAGTTAGGTAATTTAGAAAAACTCAATGTCAGAGGTTGCTCGAAATTATGCGAGAGCCAGTTGCCATCATCAATCATGGAGCTTGGGGGCTTAAGGGATGTGGTATGTGATGAAGAGATGGCCGCATTATGGGAACCTTTCAAAACCGGCCTTAGTGATCTAAAGCTAGAGGTCGTGCAAGCTGATTTCAATTTGGGTTTTCTTTATAATTTGCAATCGTGA 2067 0.418 MQAQNTRNGLETLVELKEFHAEFRRNQRTELRNVCSPPEPPALTFGFDDPLNELKLKLLQDQVSVSVLTVTGSGGSGKTTLAKMFCSDVQVKGKFKDNVFFVTFGRTPKLSTIVQKLYQHTGFHVPGFQGDEDAVNQLEHLLKQIGKSPILLVLDDIWPGSESLVDNFVFEIPNYKILVTSRSANTRFGALYVLKPLDEANAINLFRHSASLNQSNSNIPNDDVKKIVRGCSGSPLALTVTGRSLRQQHPVVWHKMARELSAGHSILDSNSDVLACLQKSLDVLDSKAIECFYDLGLFPEDQRIPASALVDMWAELHNEDDANAMVKIYKLVNLNMADIVVTREVASETVDYNFHYVKQYDLLRELAIRETSHEPVDKRNRLLIDISGNNLPSWWNLEKEYHIAARLLSISTDEALTSEWCNLQPNEVEVLVLNLREKKYTLPTFIKKMNKLKVLLITNYDFYPAELENFELLDHLSHLKRIRLEKVSIPSLTKTGVQLKNLHKFSLFMCNVNEAFKNCAMPNLMEMNIDYCGNMVELPVVLSNIVLLKKLSITNCHNLAALPEGIGMLVNLESLRLSSCTALAELPDSITSLQNLKFLDISDCINISMLPEDMGKLGNLEKLNVRGCSKLCESQLPSSIMELGGLRDVVCDEEMAALWEPFKTGLSDLKLEVVQADFNLGFLYNLQS* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03467 688 PRINTS Disease resistance protein signature 231 245 - -
Rops2g03467 688 PRINTS Disease resistance protein signature 67 82 - -
Rops2g03467 688 PRINTS Disease resistance protein signature 144 158 - -
Rops2g03467 688 PRINTS Disease resistance protein signature 591 607 - -
Rops2g03467 688 Pfam NB-ARC domain 49 262 IPR002182 GO:0043531
Rops2g03467 688 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 2 683 IPR039203 GO:0050832
Rops2g03467 688 Gene3D Ribonuclease Inhibitor 420 655 IPR032675 -
Rops2g03467 688 SUPERFAMILY RNI-like 439 646 - -
Rops2g03467 688 Gene3D - 281 366 IPR036388 -
Rops2g03467 688 Gene3D - 24 188 IPR027417 -
Rops2g03467 688 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 25 295 IPR027417 -
Rops2g03467 688 Gene3D - 196 280 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03467 Rops-Chr2 63970362 63975126 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03467 46 643 WRKY Transcription Factor Family AT5G45050 22.963 5.03e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03467 - - gmx:100812310 862.448