Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03462 ATGGGTAAGCTTCTAAATGCTGTTTTTAAGGAACTACTGAGTGAAGTAATGGAAATGAAGGACAGGGCTGTTAAGTTCAGACCCACTCTGGAACGCTTGGAGACCACCCTCAAATCCATAGGACCAGTAATCAGTCATATAGAAGAACTTAGCATGAAATTGGGCTTCCCGACGGAGGAAACAGAAGGGATAATCAAGCTCATGGTGAGTGGGAAGGAGCTTGTTCTCATGTCCTCTAAAGTCCAGTGGTGGAACTACTATGATAAGGCCCGCTTCCAAAAGAAACTTGAAGAACTGGATGAGTCAATTTCTAGGTTCTTCCAGCAAGATATGCAGGCTCAGAATACAAGGAATGTGTTGAAGATCCTGGACGAGTTTCAAAAGTATGTTGCGGAAGTGAGCAATAATGTTCCGAGTGACCAAAGGAATGAATTAGGTGGCGTGTGCTCGCCTCCTGAACCCCCTTCCTTTACCGTTGGCTTTGATGTTCCTCTAAATGAGTTGAGGCTCAAGTTGCTCCGTGACCAGGTTAGTGTCTCCGTGCTCACGGTCACCGGTTCAGGAGGTTCGGGGAAGACTACGTTAGCCAAAATGTTTTGTTGGGACGACCAAGTCAAAGGTAAATTCAATGAAAATATCTTCTTCGTAACCTTTGCGGAAAAGCCGAAGTTGAAAACCCTAGTGCAGAAACTGTATAAACACAATGGTTACCCGGTGCGTGAGTTTCAAAGTGATGAAGATGCTGTTAACCGATTGGAACATTTGCTAAAACAGATCGGGAAAACCCCAATGTTGCTGGTCCTGGATGATGTTTGGCCAGGATCGGAATCACTTATTGACAATTTTGTGTTCCAGATCCCAAACTACAAGATTTTGGTGACATCAAGATCCAAAATTAGAAGATTTGGTGATCTACACGTCTTGAAACCCCTTGGTGATAAAGATGCCATAAATCTATTTCGACACTCAGCATCCCTGAATCAGAACAGCTCTGATATTCCTGATAACGTTGTGAACGAGATAGTGAGAGGCTGCGGTGGTTCTCCCTTGGCACTAACAGTGACTGGCAGATCACTACGTCAGCAGCCTCCGATGGTTTGGCATGACATGGCGGGGGAATTAGCCTCTGGTCGTTCAATTCTTGATTCTAGCAGCGATGTGCATTCTTGTCTCCAAAAAAGCTTAGATGTTTTGGACTCTAGGGCCAAAGAGTGTTTTAGGGACCTTGGCTTATTTCCTGAAGACCAGAGGATCCCTGCTGCTGTCCTTGTTGATATGTGGGCAGAACTGCATCATGAAGAAGACGCGCGTGCAATGGCGAAAATTTATAAACTGGTCAACCTGAACATGGCTGATATTGTTGAGACAAGGAAAGTTGCAAGTGGCACAGTTGATTACAATTACCACCATGTCATGCAGCATGGTCTTCTTCGGGAGCTAGCCATCCGTCAAACTAGCCAGGAGCCAGAGGACAAGAGGAATAGACTAATTATTGACATAAGTGGAAATAATCTACCCTCATGGTGGACCTTAGAGGAAAAGTATCCCGTTGCAGCCCACCTGTTATCCATATCAGCTTGTTTGTTCCCACTATGTCTTTGTCTACTCAGCCACGTCATGACAGACACTTCAGAATGGTGCAACTTGCAGCCAACTAAAGTTGAGGTTCTAGTTCTGAACCTTCAAGAGAAGAAGTGCACACTACCAACGTTAATTAAGAAAATGAATAAATTAAAAGTTTTGATAATCACAAACTATGACTTCTACCGTGCTGACTTGGAGAATTTCGAGCTGCTTGATCATCTATCTCATCTTAAACGAATCAGATTTGAGAAAGTTTCAATTCTTTTGCTTAGCAATATCAGAGTGCAACTGAAGAATCTGCAGAAGCTTTCTCTTTTTATGTGCGATGTGAATGAAACGTTTAAAAATTGCAGTATGCCAAATTTGGTGGAGATGAACATTGCCTACAGCAATATGGTGGAATTTCCAGTTGAGCTCTCTATTATTGTTTTCTTAAAGAAGCTCAGCATTACAAACTGCCATAACCTTGCCGCACTTCCTGAAGGAATTGGAAATTTGGTCAATTTGGAATCACTAAGGCTTAGTTCCTGCACTGGTTTAGTAGAGTTGCCAGACTCAGTCACAAACCTTCATAGCCTAAAATTTCTTGACATCTCTTTCTGCATAAACCTTACCAAGTTACCTGAGAACATGGGCGAGTTAGGTAATTTAGAAAAGCTAAATGTCAGAGGTTGCCTGAAATTAAGCGAGAGCCAGTTGCCATACTCAATCACGGAACTTGGGAGCTTAAGGCATGTGGTATGCGATGAAGAGATGGCTGCGTTATGGGAACCTTACACAACCATCCTCAGTGGGCTAAGGCTAGAGGTCGAGCAGCAAGCTGATTTGGATTTGGGTTTTCATTATCATTTGCTCTAG 2442 0.4328 MGKLLNAVFKELLSEVMEMKDRAVKFRPTLERLETTLKSIGPVISHIEELSMKLGFPTEETEGIIKLMVSGKELVLMSSKVQWWNYYDKARFQKKLEELDESISRFFQQDMQAQNTRNVLKILDEFQKYVAEVSNNVPSDQRNELGGVCSPPEPPSFTVGFDVPLNELRLKLLRDQVSVSVLTVTGSGGSGKTTLAKMFCWDDQVKGKFNENIFFVTFAEKPKLKTLVQKLYKHNGYPVREFQSDEDAVNRLEHLLKQIGKTPMLLVLDDVWPGSESLIDNFVFQIPNYKILVTSRSKIRRFGDLHVLKPLGDKDAINLFRHSASLNQNSSDIPDNVVNEIVRGCGGSPLALTVTGRSLRQQPPMVWHDMAGELASGRSILDSSSDVHSCLQKSLDVLDSRAKECFRDLGLFPEDQRIPAAVLVDMWAELHHEEDARAMAKIYKLVNLNMADIVETRKVASGTVDYNYHHVMQHGLLRELAIRQTSQEPEDKRNRLIIDISGNNLPSWWTLEEKYPVAAHLLSISACLFPLCLCLLSHVMTDTSEWCNLQPTKVEVLVLNLQEKKCTLPTLIKKMNKLKVLIITNYDFYRADLENFELLDHLSHLKRIRFEKVSILLLSNIRVQLKNLQKLSLFMCDVNETFKNCSMPNLVEMNIAYSNMVEFPVELSIIVFLKKLSITNCHNLAALPEGIGNLVNLESLRLSSCTGLVELPDSVTNLHSLKFLDISFCINLTKLPENMGELGNLEKLNVRGCLKLSESQLPYSITELGSLRHVVCDEEMAALWEPYTTILSGLRLEVEQQADLDLGFHYHLL* 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03462 813 Gene3D - 311 394 IPR042197 -
Rops2g03462 813 Gene3D Ribonuclease Inhibitor 536 786 IPR032675 -
Rops2g03462 813 Gene3D - 395 480 IPR036388 -
Rops2g03462 813 PRINTS Disease resistance protein signature 716 732 - -
Rops2g03462 813 PRINTS Disease resistance protein signature 258 272 - -
Rops2g03462 813 PRINTS Disease resistance protein signature 345 359 - -
Rops2g03462 813 PRINTS Disease resistance protein signature 181 196 - -
Rops2g03462 813 Pfam NB-ARC domain 165 375 IPR002182 GO:0043531
Rops2g03462 813 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 4 800 IPR039203 GO:0050832
Rops2g03462 813 Gene3D - 138 302 IPR027417 -
Rops2g03462 813 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 2 128 IPR008808 -
Rops2g03462 813 SUPERFAMILY RNI-like 550 774 - -
Rops2g03462 813 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 409 IPR027417 -
Rops2g03462 813 ProSiteProfiles RPW8 domain profile. 1 145 IPR008808 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03462 Rops-Chr2 63832045 63836388 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03462 159 418 WRKY Transcription Factor Family AT5G45050 24.627 9.39e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03462 - - gmx:100812310 913.679