Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03454 ATGGTAGCTTGTGCAACTTTGCCAACGTTGAGTGTTGGGGATGCATTTATATTTCTAAGGGGTGAGAATGGGGAACTTCGAGTGGGTGTCAGGAGTGCAATGAGGCAGCAGGGTAATGTTCCATCGTTGGTCATCTCTAGCCACACGCATCCATGCAACTCGGTGAGTGGGTCAGGCCGTGGTCGAATTTTCATACGGAAAAAGAAATGTGGTCAGGTTGTTCGTGTCATGGAAGTAGATAAGCATGTTGTGAATTGCATTGAGTCTCGTCCTCATACGATGGTTCTTGCAAGTAGCGATATTGAGCATGACATCGAGATATGGACTCCAAAGGCCCTCGAGAAAGCTACCTTGCCCAAAAATATTGAGCAGAAACCCAAGGCTAGGGGCTAG 393 0.4758 MVACATLPTLSVGDAFIFLRGENGELRVGVRSAMRQQGNVPSLVISSHTHPCNSVSGSGRGRIFIRKKKCGQVVRVMEVDKHVVNCIESRPHTMVLASSDIEHDIEIWTPKALEKATLPKNIEQKPKARG* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03454 130 PANTHER WD REPEAT DOMAIN-CONTAINING FAMILY 55 125 IPR045151 -
Rops2g03454 130 SUPERFAMILY WD40 repeat-like 48 108 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03454 Rops-Chr2 63688829 63689536 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03454 10 49 B3 DNA Binding Superfamily AT5G62000 87.500 3.80e-17 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03454 K11804 - gmx:100791300 131.339