Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03449 ATGGCTTGTTCCGTAGTTGGTAGAAGGGCTACATATGCAACACAACCTGTATCTACAAATGAGCTAGTTGTTTCTGTGGATTGGCTTTATGATAACTTGAAGGAGCCTGATATGAAGGTGCTGGATGCATCCTGGTACATGCCGGATGAGCAGAGGAATCCGATTCAAGAATATCAGGTTGCTCATATTCCTGGGGTCCTTTTCTTTGATGTAGATGGAATTGCAGATCGAAATACAAGTTTGCCACACATGCTGCCATCAGAGGAAGCTTTTGCTGCTGCCGTTTCTGCTCTTGGCATACAGAACAAAGATGATGTGGTTGTTTATGATGGCAAAGGATTATTTAGTGCAGCTCGTGTTTGGTGGATGTTCCGAGTGTTTGGGCATGATAGAGTATGGGTGTTAGAAGGCGGTCTGTCTAGATGGCGTGCATCAGGTTATGATGTTGAAACTAGTGCTTCGAGTGATGCTATTCTTAAAGCCAGTGCTGCAAGTGAGGCAATAGAGAAAATTATCATGCACCACAAGGCTCTCCGAGGAGCTCTTCCAGGTGACCAGAACGTGAGGAGTGTTGCAAAGATCTCAAGCACGGTTTTGTGGCATCCAACTCGAAGAGGGACCCGACCAGGAGGGTGCCAAGTTCACGTCCATGCAGCCCGTGATCACATCCGTGACCAAAACAAAGAGAGTTTGCTTGGAAACGGTGGCCACGAAATGGCTTACTCAACATGCACAGGCTCCATACACGTGAAGGAGGCCTCTACCCTGTCTTCGTGA 777 0.4736 MACSVVGRRATYATQPVSTNELVVSVDWLYDNLKEPDMKVLDASWYMPDEQRNPIQEYQVAHIPGVLFFDVDGIADRNTSLPHMLPSEEAFAAAVSALGIQNKDDVVVYDGKGLFSAARVWWMFRVFGHDRVWVLEGGLSRWRASGYDVETSASSDAILKASAASEAIEKIIMHHKALRGALPGDQNVRSVAKISSTVLWHPTRRGTRPGGCQVHVHAARDHIRDQNKESLLGNGGHEMAYSTCTGSIHVKEASTLSS* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03449 258 ProSiteProfiles Rhodanese domain profile. 34 151 IPR001763 -
Rops2g03449 258 Gene3D - 17 158 IPR036873 -
Rops2g03449 258 Pfam Rhodanese-like domain 25 144 IPR001763 -
Rops2g03449 258 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 21 153 IPR036873 -
Rops2g03449 258 PANTHER THIOSULFATE SULFERTANSFERASE 17 176 IPR045078 GO:0016783
Rops2g03449 258 FunFam Sulfurtransferase 16 158 - -
Rops2g03449 258 CDD TST_Repeat_1 23 146 - -
Rops2g03449 258 SMART rhod_4 24 148 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03449 Rops-Chr2 63535236 63538176 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03449 1 171 Sulfurtransferasese or Rhodanese AT1G79230 80.117 8.86e-99 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03449 K01011 - gmx:100798053 311.612