Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03438 ATGGAACCCAGAAATAAGAGATCTCGACCCAGTCGTTTTCCAATTCCTTTTCCAGTCAAGAACAACTACGAAAAGAACTTACCTGCTGCAATGGTATCTTCTTGCTTGAATTTGAAGAAAAAGTCTATTATTTTCAATGTTGGAGGTGGAAGGACTTGGAAATTTGGTTTATACCATCATGAAAGCCGTGGTTCTGAAGCCAGGATATCCACTGGATGGAAATCCTTTTGCGCGGATCACCAATTAAAAGCAGGGGACAAAATTGTTGTTGAGGTTGCTGATCCATTGAAGAACCACTTCAATGCTGACATTGTTAGAGTTTAA 324 0.3981 MEPRNKRSRPSRFPIPFPVKNNYEKNLPAAMVSSCLNLKKKSIIFNVGGGRTWKFGLYHHESRGSEARISTGWKSFCADHQLKAGDKIVVEVADPLKNHFNADIVRV* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03438 107 SMART B3_2 13 103 IPR003340 GO:0003677
Rops2g03438 107 SUPERFAMILY DNA-binding pseudobarrel domain 24 101 IPR015300 -
Rops2g03438 107 CDD B3_DNA 27 91 IPR003340 GO:0003677
Rops2g03438 107 Gene3D - 5 107 IPR015300 -
Rops2g03438 107 Pfam B3 DNA binding domain 24 94 IPR003340 GO:0003677
Rops2g03438 107 ProSiteProfiles B3 DNA-binding domain profile. 10 107 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03438 Rops-Chr2 63324944 63326328 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Rops2g03438 B3 6e-12 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03438 - - psom:113298288 50.447