Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03416 ATGGACCAAGCCGAATTAACCATCGAACAGGTTCTGAGGAGGGACATCCCATGGGAGACCTACATGTCCACCAAGCTCATCTCAGGAACAAGCCTTCAACTCTTAAGGCGTTTCGATCACCGATCAGAAAGTCACAGAGCACAGTTGCTCGATGATGATGGTCCTGCTTATGTTCGTGTGTTTGTTCGTGTTTTGCGTGATATTTTCAAAGAAGACACTGTTGAGTATGTTTTGGCACTGATTGATGAAATGCTTACAGCAAACCCCAAAAGAACAAGACTGTTTCATGACAGCACCCTTGCAGATGAAGATACTTATGAGCCTTTCCTAATGGGTTCACATCTTGCTTCAACCATTGATGACATATATCTGCATGTAGATAAAATATGTGCTTGTTGGGATTGTGCTTCGAAATTGCTTCGGAAAGGAAATTGGTTCATACAAGAGAAAAGTTGTAAAATCCTTGCTTTAATAGTTAGTGTGAGGCCCAAAAATCAGCACGACATGGCTTCAAATGGAGAAGCATCAAATGCAAAGAAACCATTTACCACTATTGATGATGTTTTGATAGAATTGGTGAAATGGCTTTGTGAACAGCTGAAGAAACCTTCTCATCCTACTCGTGGAGTCCTGACTGCTATCAATTGCCTAGCAACTCTACTCAAGGAACCTGTGGTTAGGTCTTCCTTTGTTCAAGCGGATGGAGTCAAGTTGCTTGTGCCATTGATTTCTCCAGCATCCACCCAACAGTCTATTCAGCTTCTTTATGAAACATGTCTCTGCATATGGCTCTTATCCTATTTTGAGCCAGCAATTGAATATTTGGCTACTTCAAGGGCCCTTCCAAGACTTATTGATGTTGTCAAGAGTTCTACAAAAGAGAAGGTTGTTAGAGTTGTTGTCTTGACCCTTAAAAACTTGCTGTCGAAAGGGACATTGGGTGCTCAGATGGTTGACCTTCAGCTGCCACAAGTTGTTCAGAGTTTAAAAGCACAAGCATGGAGTGATGAGGACTTGTTGGAGGCTCTGAATACCCTGGAAGAAGGGCTTAATGATAACATCAAGAAACTAAGTTCTTTTGATATGTACAAGCAAGAAGTTCTTCTTGCCAATCTGGATTGGTCTCCCATGCACAAAGATCCCATATTTTGGCGAGAAAATATAAACAATTTTGAAGAGAATGATTTCCAGATTCTAAGGGTCCTAATAACTATTTTGGACACATCCAGTGATCCAAGGACTGTGGCTGTTGCTTGCTTTGACCTTTCACAATTCATCCAGTACCATCCGGCTGGGCGTATTATTGTGACGGACCTAAAAGCCAAGGAACGAGTGATGAAACTAATGAATCATGAGAATGCTGAGGTTACTAAAAACGCACTGCTCTGCATTCAACGGCTTTTCTTAGGTGCAAAGTATGCAAGCTTCTTGCAGGCTTAG 1440 0.4181 MDQAELTIEQVLRRDIPWETYMSTKLISGTSLQLLRRFDHRSESHRAQLLDDDGPAYVRVFVRVLRDIFKEDTVEYVLALIDEMLTANPKRTRLFHDSTLADEDTYEPFLMGSHLASTIDDIYLHVDKICACWDCASKLLRKGNWFIQEKSCKILALIVSVRPKNQHDMASNGEASNAKKPFTTIDDVLIELVKWLCEQLKKPSHPTRGVLTAINCLATLLKEPVVRSSFVQADGVKLLVPLISPASTQQSIQLLYETCLCIWLLSYFEPAIEYLATSRALPRLIDVVKSSTKEKVVRVVVLTLKNLLSKGTLGAQMVDLQLPQVVQSLKAQAWSDEDLLEALNTLEEGLNDNIKKLSSFDMYKQEVLLANLDWSPMHKDPIFWRENINNFEENDFQILRVLITILDTSSDPRTVAVACFDLSQFIQYHPAGRIIVTDLKAKERVMKLMNHENAEVTKNALLCIQRLFLGAKYASFLQA* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03416 479 Pfam V-ATPase subunit H 5 350 IPR004908 GO:0000221|GO:0046961|GO:1902600
Rops2g03416 479 Pfam V-ATPase subunit H 356 468 IPR011987 GO:0000221|GO:1902600
Rops2g03416 479 SMART arm_5 429 469 IPR000225 GO:0005515
Rops2g03416 479 SMART arm_5 222 267 IPR000225 GO:0005515
Rops2g03416 479 SMART arm_5 268 309 IPR000225 GO:0005515
Rops2g03416 479 Gene3D - 370 471 IPR038497 -
Rops2g03416 479 FunFam V-type proton ATPase subunit H 370 471 - -
Rops2g03416 479 Gene3D - 5 358 IPR011989 -
Rops2g03416 479 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 1 478 IPR004908 GO:0000221|GO:0046961|GO:1902600
Rops2g03416 479 SUPERFAMILY ARM repeat 8 469 IPR016024 -
Rops2g03416 479 PIRSF V-ATP_synth_H 1 478 IPR004908 GO:0000221|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03416 Rops-Chr2 62761524 62768174 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03416 1 479 Primary Pumps ATPases(2) AT3G42050 73.486 0.0 713
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03416 K02144 - gmx:100788723 810.061