Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03412 ATGCATCTCTTTACCATCATCCTTGTCTTCACTTTGACCATATTATGTAGATTCTCTGTGGTTCTTGGACAGCAACCTTACGTTGGTGTGGCCACAACAGCATGTCATCAAACGGGTAATTCAAATTCTATCCGTGGTTACACTTGTAATGGCATAAATCCTAGTTGCCAAGCTTACCTTACCTTCAGGACTCAACCACTCTACAACTCTATTCCCACAATATCTGCTTTGTTGGGTTCTGATCCATCACAGCTTTCTGAGGCAAACTCAGTTTCTGAGGACACAACCTTTGAAACAGACAAGTTGGTGATTGTTCCAGTCAATTGTTCTTGTGAAGGTAATCAGTATTATCAGTTCAACACATCCTATGTGGTCCAAAAAAATGACACCTACCTTGTAATTGCTAACAACACTTTTGAAGGGCTCTCAACATGTCAAGCTTTGCAGGATCAAAATAGCATTTCCGAAGGAGACCTATTACCCGGTTCAAAACTTAGAGTTCCTCTTAGATGCGCTTGCCCCTCAAAAAATCAAACTGAGAAAGGCCTGAAGTATCTATTGAGTTACCTGGTAGCATCTAATGATGATGTTTCTCTCATTAGTGAAAGATTTGGTGTCAGCACTGAGACAATTCTTGAAGCTAATAGTCTTTCTTTTCAACAGTCCACTATCTATCCATTTACAACACTTCTAGTACCTCTTCAAGACAAGCCCTCGAGTAACCAAACCATTGATCCACCTCCACCTCCATCACCTACCCCTTCTCCCTCAAATGGAAGCTCAAGCAAAACATGGGTGTATGTAGTTGTAGGAGTTGTTGGAGGTGTTGCCTTATTATTAGTTCTCTGTGCCATCATTTTCAGGACACGTTATCACCAAAGTGATAAAAAGAAAGATGATTCCATGATTGTGTCGGAGAGTTTTGAGGCAATTATGAAAATGCAAGGGAAGAAGTTGGAGGAAGAGTCTGAAAGTTTGTCAGAGATCATATCTGGCATAGCTCAATCATTCAAGGTGTACGGTTTTAAGGAACTAAAGATTACTACAAATAATTTTAGTCCTAGCTGCAGGATCAAAGGATCAGTTTATAAGGGTGTTATCAATGGTGATTTGGCTGCAATTAAAAAGATAGATGGAGATGTGTCAAAAGAGATAGAATTGTTGAGCAAAGTGAACCATTCTAATGTCATACGCCTTTCTGGGGTTAGCTTTAACGAGGGCTATTGGTATCTTGTTTATGAGTATGCTGCTAAAGGACACTTGAGTGATTGGATCTACTTCAACAATGGGAAGTTTCTGAGTTGGACACAGAGAATACAGATTGCATTGGATGTGGCCACAGGACTTGAATATCTTCATAGTTTCACTTCTCCTCCTTATATCCACAAAGATCTAAAGAGTGATAACATTCTTCTGGATGGTGAGTTCAGGGCAAAGATTGCAAACTTTAGTCTTGCTAGGTCTGTGGAAGGAGAGGGTGACCAATTTCCCATGACAAGGCATATTGTTGGGACAAGAGGTTACATGGCTCCTGAGTATTTGGAAAATGGTATAGTGTCTACAAAACTTGATGTCTATGCATTTGGGGTTCTTATGTTGGAAATGCTCACTGGGAAAGAGGTTGCTGCTATATACTCAGAAGGTAATATGAATTTGTCAGATGTTTTGAGAACTGAACTTGAAGAGGAAGAAGGTGCACATGAAAGGTTGAGAGACTTCATTGATTCCTCCCTGCAAGGAAATTATCCAATGGAACTTGCTATATTTGTAGCTGGAATGATAGACACTTGTATAAAGAAAGATCCAGCAAGTCGCCCTGCCATTCATGAAATAGTGTCATCTTTGTCCAAAGCCTTGGACTCTTCCTTGAATTGGGAAACGTCAGTGAACATCTCAGGATACCAGAGCTTTAGCTAG 1917 0.4027 MHLFTIILVFTLTILCRFSVVLGQQPYVGVATTACHQTGNSNSIRGYTCNGINPSCQAYLTFRTQPLYNSIPTISALLGSDPSQLSEANSVSEDTTFETDKLVIVPVNCSCEGNQYYQFNTSYVVQKNDTYLVIANNTFEGLSTCQALQDQNSISEGDLLPGSKLRVPLRCACPSKNQTEKGLKYLLSYLVASNDDVSLISERFGVSTETILEANSLSFQQSTIYPFTTLLVPLQDKPSSNQTIDPPPPPSPTPSPSNGSSSKTWVYVVVGVVGGVALLLVLCAIIFRTRYHQSDKKKDDSMIVSESFEAIMKMQGKKLEEESESLSEIISGIAQSFKVYGFKELKITTNNFSPSCRIKGSVYKGVINGDLAAIKKIDGDVSKEIELLSKVNHSNVIRLSGVSFNEGYWYLVYEYAAKGHLSDWIYFNNGKFLSWTQRIQIALDVATGLEYLHSFTSPPYIHKDLKSDNILLDGEFRAKIANFSLARSVEGEGDQFPMTRHIVGTRGYMAPEYLENGIVSTKLDVYAFGVLMLEMLTGKEVAAIYSEGNMNLSDVLRTELEEEEGAHERLRDFIDSSLQGNYPMELAIFVAGMIDTCIKKDPASRPAIHEIVSSLSKALDSSLNWETSVNISGYQSFS* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03412 638 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Rops2g03412 638 Gene3D Phosphorylase Kinase; domain 1 321 415 - -
Rops2g03412 638 MobiDBLite consensus disorder prediction 242 256 - -
Rops2g03412 638 Pfam LysM domain 123 168 IPR018392 -
Rops2g03412 638 Pfam LysM domain 189 233 IPR018392 -
Rops2g03412 638 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 6 628 - -
Rops2g03412 638 Gene3D LysM domain 118 177 IPR036779 -
Rops2g03412 638 SMART serkin_6 352 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03412 638 FunFam PTI1-like tyrosine-protein kinase 3 416 629 - -
Rops2g03412 638 Gene3D LysM domain 178 246 IPR036779 -
Rops2g03412 638 ProSiteProfiles LysM domain profile. 187 232 IPR018392 -
Rops2g03412 638 SUPERFAMILY LysM domain 187 233 IPR036779 -
Rops2g03412 638 Pfam Protein kinase domain 360 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03412 638 SUPERFAMILY Protein kinase-like (PK-like) 335 615 IPR011009 -
Rops2g03412 638 MobiDBLite consensus disorder prediction 236 258 - -
Rops2g03412 638 SMART LysM_2 188 233 IPR018392 -
Rops2g03412 638 SMART LysM_2 122 168 IPR018392 -
Rops2g03412 638 ProSiteProfiles Protein kinase domain profile. 297 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03412 638 Gene3D Transferase(Phosphotransferase) domain 1 417 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03412 Rops-Chr2 62756345 62758433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03412 7 628 Receptor kinase-like Gene Family AT2G23770 44.953 2.94e-180 523
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Rops2g03412 Pkinase 6.7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03412 - - gmx:100806077 894.034