Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03394 ATGTACCCTGATACTCTTGTTGTGTTACCTTCTGATGTTCAAGTTGTAGTACTGACTGATTTACAATGCCTGTTAATTGCTCATATTCGTTCTCTGGTTCTCACTATCTGCGGAGTGCAGCAACAACTGTTAGGGAAGTTTGATGCTGTGGGGTGTGGCCAAGGAACAAGGGGTGTTAGTGGAAAATCATTTCAGGGAGCAGCTAGGATGTGTCAGGACAAACAGTACAAATCAACAATAGCCCAAACAGCAACCCAACAACATTTAACTATAATCTATTTGAAGGACCTCTTCCTCCCAGCCTTGGAAACAGAGATTTGCATTGGGGGTGTTACCTATAATAATACTAATCTCATGGATGAGAAAGCTAAGAAGAAAAGGTCTGAGATTGACAGAAGCAATTTGGGAAGTAGTTTTGAGCTGGGGCCAAATGAAGGAAAGAAAAAGAAGCACAAGGAGAGAAAGAAAAAGCATGCAACTGATAAAATACTCCATTCAAATAAAACCCTTGAAGAAAATTGTACTGGCGAAACAGCTGACAAACAAGCCTACTCTATTGAAGGGAATATTACATTCATGTGGAATGGGGAAGAAGTGAGCCACATCAATAAGAGAAAGAAGAAAAAGGTGAGGGAAGATATTGAAGTGATGGCTAGTAATATTGCTGATGATAAAGAAGTGCAGTTCTTGGATGAGAACCAACAAAGCAAGATGAAGAAAAGAAAAAAATATGATGATCTGTTAACTGGAATGCAAGAAATGGGTTCTTCAAAACCAAGCAAAAAAGGAAAAATGACAGAGGATAATGAATTAAAAAACAATGAAGGTGATATTCCTTTGGATAGAATAGTCACGGGAAATGCTAATGCACATTCTCTTGTGGCCGAAGTTGATTTTCAAGGTGAGAGAATGGAGAAGAAGAAACTGAGTAAGATAAACAAAAGAACTGAAGATGAAGAGTATGAAACCAATGGAGGTGATCCGTGTTTGGCCAAAAGCAATATAGTTGATCTACCTTTGGTCCAAAGTAATGGTGATCAACATTTGGTCAAAAGCAATGAAGGTGAAAATGATGACCAAGGCAAGAAGAAGAAGAATAAGAAGAAGAAACTGAGTGAAGAAAGCAAACATAAGGAGTATAATGAGTTTAAAAGCAACGAAGGTGAAGATGATGACCCAAGCAAGAAGATGAAGAAGAAGAAGAAACTAATTGAAGAAAGCAAACATAAAGAATATAGTGAGTTTGGAAGCAATGAAGGTGAAGATGGTGACCAAGGCAAGAAGAAGAAGAAGAAACTGAGTGAAGAAATCAAACACAAGGAGTATAACGAGTTTAAAAGCAATGAAGGTGAAGATGATGACCCAGGCAAGAAGATGAAGAAGAAGAAGAAACTAATTGAACAAAGCAAACATAAGAAATATAATGAGTTTGGAAGCGATGAAGGTGAAGACGGTGACCAAGGCAAGGAGAAGAAGAAGAAGAAGAAACTGAGTGACAAAAGAAAAAGCAAGGAGAACAGTGAGTTTAATAGCAATGAAGGGGGTCCACCTTTGGCTAGAGTTGAGTCAGGAGATGCTAATGCTCGATGCATTGTCACTGAAGTTAATGATCAAGGCAAGAAGATGAAGAAAAAAATGAAAGCTAAGGCAGGTACGGGTGAATCTCCTGGCCCTGCACGTGATGGATCATCCAAACCCAAACGAGTTACTTTTTCTGATCAAGTGGAGATTTGTTGTGATAGCTTAGTGCGTGGGAAAAGGTTTACACCAGAAGAAGATGAGAAGATCAAAGCGGCTGTTTTTGATTATATAGAGTCTCATGGTTTGGGAGATGAAGGTCTAGATATGATTCTGCATTGCAAATCTCATCCTAAAATTAGAGATTGTTGGAAGGATATTGCAGCGGCCTTACCTGAGAGGCCTCAAACTAGTGTGTATTGTCGTGCTCATATTATTTTTGAAAGGGATGAGAAGCGTAAATGGACACCTGAAGAGCTTGAATTTATACTAAAGGTCCAGAAACAACATGGATCTGATTGGAAATCAATAGCTGAAGTCTTGGGTAAACACCGGATTCATGTAAAGGATGCATGGCGTAGAATAAAATTAACCAATATAAACAGAGGACATTGGTCCCAAGAGGAATATCAAAAGTTATTTGATTTAGTAAACCTGGATCTACGCTCGAGGGCTGCAGAAGATTATAGAAAATCAAAACATGGTATGTTGCGAGATAATATTACTTGGGAGGCAATTGCTAACAAATTCACTAGAACCAGTCAATGGTGCTGCAAAAAGTGGTATGAGCAATTAACATCACGTATGGTTGCTAATGGTGAATGGTGTGATACTGATGACTACCGCTTGTTAGATGCTTTATGTACTTTGGATGCTTGCTGCTTTGAGGAGGTAGACTGGGACAACCTGCTTGAGCATAGGTCTGGTGATGTATGCAGGAAAAGATGGAATCAAATGGTTCAATATATTGGAGAGCATGTAGGGAAGTTATTTGCTGAGCAGGTTGAAATTCTTGCAAAGAGATTTTGCCCCGATTTATTGGAAGCAAGAGAGGCCTTTGATAGCACACCTCTTCCAGCTTGTAATCCCTCCCAGTTACAGCTCTCAAATTGTGTTCCCAACTGTAGCTCTCTGGTGATTCCATCGTCCACGAGCCACTTCTCCGGCGAGAAGATGACGGAGGAAGGCATGGGATCCGAGAAGGGACAAGCCTTCGAACCTGAAATCAAAGGCCAATCAATCGTTGAAAGTGCCAAACTCTTAGGGCTTTTGCTCCAATGTGCTCCAAATTGGTAA 2814 0.3987 MYPDTLVVLPSDVQVVVLTDLQCLLIAHIRSLVLTICGVQQQLLGKFDAVGCGQGTRGVSGKSFQGAARMCQDKQYKSTIAQTATQQHLTIIYLKDLFLPALETEICIGGVTYNNTNLMDEKAKKKRSEIDRSNLGSSFELGPNEGKKKKHKERKKKHATDKILHSNKTLEENCTGETADKQAYSIEGNITFMWNGEEVSHINKRKKKKVREDIEVMASNIADDKEVQFLDENQQSKMKKRKKYDDLLTGMQEMGSSKPSKKGKMTEDNELKNNEGDIPLDRIVTGNANAHSLVAEVDFQGERMEKKKLSKINKRTEDEEYETNGGDPCLAKSNIVDLPLVQSNGDQHLVKSNEGENDDQGKKKKNKKKKLSEESKHKEYNEFKSNEGEDDDPSKKMKKKKKLIEESKHKEYSEFGSNEGEDGDQGKKKKKKLSEEIKHKEYNEFKSNEGEDDDPGKKMKKKKKLIEQSKHKKYNEFGSDEGEDGDQGKEKKKKKKLSDKRKSKENSEFNSNEGGPPLARVESGDANARCIVTEVNDQGKKMKKKMKAKAGTGESPGPARDGSSKPKRVTFSDQVEICCDSLVRGKRFTPEEDEKIKAAVFDYIESHGLGDEGLDMILHCKSHPKIRDCWKDIAAALPERPQTSVYCRAHIIFERDEKRKWTPEELEFILKVQKQHGSDWKSIAEVLGKHRIHVKDAWRRIKLTNINRGHWSQEEYQKLFDLVNLDLRSRAAEDYRKSKHGMLRDNITWEAIANKFTRTSQWCCKKWYEQLTSRMVANGEWCDTDDYRLLDALCTLDACCFEEVDWDNLLEHRSGDVCRKRWNQMVQYIGEHVGKLFAEQVEILAKRFCPDLLEAREAFDSTPLPACNPSQLQLSNCVPNCSSLVIPSSTSHFSGEKMTEEGMGSEKGQAFEPEIKGQSIVESAKLLGLLLQCAPNW* 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03394 937 MobiDBLite consensus disorder prediction 303 322 - -
Rops2g03394 937 MobiDBLite consensus disorder prediction 251 280 - -
Rops2g03394 937 MobiDBLite consensus disorder prediction 303 568 - -
Rops2g03394 937 MobiDBLite consensus disorder prediction 124 161 - -
Rops2g03394 937 SMART sant 707 773 IPR001005 -
Rops2g03394 937 SMART sant 657 704 IPR001005 -
Rops2g03394 937 SMART sant 584 655 IPR001005 -
Rops2g03394 937 Gene3D - 662 701 - -
Rops2g03394 937 ProSiteProfiles Myb-like domain profile. 653 702 IPR001005 -
Rops2g03394 937 MobiDBLite consensus disorder prediction 469 493 - -
Rops2g03394 937 PANTHER GB|AAC33480.1 128 863 - -
Rops2g03394 937 Gene3D - 702 776 - -
Rops2g03394 937 ProSiteProfiles Myb-like domain profile. 703 771 IPR001005 -
Rops2g03394 937 CDD SANT 711 769 IPR001005 -
Rops2g03394 937 CDD SANT 660 689 IPR001005 -
Rops2g03394 937 Pfam Myb-like DNA-binding domain 661 719 - -
Rops2g03394 937 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 658 706 IPR017930 -
Rops2g03394 937 MobiDBLite consensus disorder prediction 372 461 - -
Rops2g03394 937 ProSiteProfiles Myb-like domain profile. 773 826 IPR001005 -
Rops2g03394 937 MobiDBLite consensus disorder prediction 260 277 - -
Rops2g03394 937 SUPERFAMILY Homeodomain-like 658 719 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03394 Rops-Chr2 62426749 62433269 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03394 655 792 MYB Transcription Factor Family AT4G32730 28.873 1.36e-06 50.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Rops2g03394 Myb_DNA-bind_6 6.1e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03394 - - gsj:114382741 744.962