Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03388 ATGGGGACTGGGGAAGGGAGCACAGTGAAACCTTCTAAATCATCTTCATCAACTCAGGAGATACCAACAGTGCCATCATATCCTGATTGGTCAGGCTCCATGCCGGCCTATTATGCTCCTGGAGCCACTCCACCTCCCTTTTTTGCCTCAACTGTTGCTTCCCCAACTCCCCATCCGTATTTGTGGGGAAGCCAGCATCCTTTAATGCCACCATATGGGACTCCAGTCCCATATCCAGCTATATACCCTCCTGGGAATATCTATGCTCATCCTAGCATGGCAGTGACTCCAAGTGCTATGCCGCAAAGTACAGAGATTGAAGGGAAGGGACCTAATGGAAAAGATCAGGATTCATCCAAAAAATCAAAGGGAACTTCTGCAAATACATGTGCCAAAGCAGGAGAGAGTGGAAAGGAAGGCTCAGGTTCAGGCAATGATGGCATTTCACAAAGTGCTGAAAGTGGTTCAGAGGGTTCATCAAATGCTAGTGATGAGAATACTAACCAACAGGAATCGGCTACAAACAAGAAGGGAAGATTTGACCAGATGCTTGTTGATGGAGCCAATGCACAGAACAATTCTGGTGGTGCCATTTCTCAATCCCTTGTGCCTGCAACCAATCTTAATATTGGAATGGACTTATGGAATGCATCTTCTGCTGGTGCCGAAGCTGCAAAAATGAGACATAATCAATCTGGTGCTCCTGGAGCTGTTGCTCCTTCAACCATGATGGGACGCGAAGTTGTACTTGGTGAACAATGGATACAAGATGAACGTGAGCTGAAAAGACAGAAGAGAAAACAGTCTAACAGAGAGTCAGCTAGGAGGTCAAGACTACGCAAGCAGGCTGAGTGTGAAGAGTTACAAAAGAGGGTGGAAACGCTGGGAAATGAGAATCGAACTCTCAGTGAAGAGCTTCAGAAACTTTCTGAAGAATGTGAGAAGCTTACATCAGAAAACAATTCTATCAAGGAAGAGTTGGAACGATTGTGTGGGCCAGAAGCAGTTGCTAACCTTGGATGA 1023 0.4594 MGTGEGSTVKPSKSSSSTQEIPTVPSYPDWSGSMPAYYAPGATPPPFFASTVASPTPHPYLWGSQHPLMPPYGTPVPYPAIYPPGNIYAHPSMAVTPSAMPQSTEIEGKGPNGKDQDSSKKSKGTSANTCAKAGESGKEGSGSGNDGISQSAESGSEGSSNASDENTNQQESATNKKGRFDQMLVDGANAQNNSGGAISQSLVPATNLNIGMDLWNASSAGAEAAKMRHNQSGAPGAVAPSTMMGREVVLGEQWIQDERELKRQKRKQSNRESARRSRLRKQAECEELQKRVETLGNENRTLSEELQKLSEECEKLTSENNSIKEELERLCGPEAVANLG* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03388 340 Coils Coil 271 326 - -
Rops2g03388 340 PRINTS cAMP response element binding (CREB) protein signature 295 312 - -
Rops2g03388 340 PRINTS cAMP response element binding (CREB) protein signature 275 295 - -
Rops2g03388 340 PRINTS cAMP response element binding (CREB) protein signature 257 273 - -
Rops2g03388 340 MobiDBLite consensus disorder prediction 260 280 - -
Rops2g03388 340 SMART brlzneu 258 322 IPR004827 GO:0003700|GO:0006355
Rops2g03388 340 FunFam BZIP transcription factor 260 311 - -
Rops2g03388 340 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 336 IPR044827 GO:0003700|GO:0006355|GO:0043565
Rops2g03388 340 MobiDBLite consensus disorder prediction 1 29 - -
Rops2g03388 340 Pfam bZIP transcription factor 258 320 IPR004827 GO:0003700|GO:0006355
Rops2g03388 340 Gene3D - 261 315 - -
Rops2g03388 340 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 260 323 IPR004827 GO:0003700|GO:0006355
Rops2g03388 340 Pfam G-box binding protein MFMR 8 93 IPR012900 -
Rops2g03388 340 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 265 280 IPR004827 GO:0003700|GO:0006355
Rops2g03388 340 MobiDBLite consensus disorder prediction 142 177 - -
Rops2g03388 340 MobiDBLite consensus disorder prediction 1 26 - -
Rops2g03388 340 CDD bZIP_plant_GBF1 263 313 IPR045314 GO:0003700|GO:0006355
Rops2g03388 340 MobiDBLite consensus disorder prediction 93 177 - -
Rops2g03388 340 SUPERFAMILY Leucine zipper domain 261 317 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03388 Rops-Chr2 62352054 62357110 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03388 1 339 bZIP Transcription Factor Family AT4G36730 52.907 5.32e-107 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Rops2g03388 MFMR 9.1e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03388 K09060 - gmx:778191 516.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03388 2 62352054 62357110 Rops2g03388 2 62352054 62357110 ECH