Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03387 ATGAGAGTTCCTGTTACCTCATCACCACAGGCCAACCAAAAACTCACCTCAAACGTTGTTCTCCAAACCCCTCCTCCCAACAACAACAATAATCCAACAACTTTGTGCTACGAACCCACCTCTGTGCTTGACCTCTGCCGTAGTCCAAGTCCTGAAAAGAAAGCCACTGTCCCAAAACCAGAACCAGAAGAGCATATAGAACTGGAAGATCATGTGTTGCCTAATTTGGACTGGTGGGAATCCATCATGAAGGACTTGGGTTTACATGATGACTCTTCCACACCCCTTTTGAAAACTAATACTGATAATCTCAATTCCAATCCATGCATCCCTGAAATCTATCCCATTCCCAATACTTCTCACGACCCACCCTTTGATCACCCTCCAGATTTCACCACTTTCTCAGAGATTTACTCCAATCAAAACCTTGCCTACAACTACACCACAAACACCAACACCAACACCACTTTGGACCATTTGGTTCATGACTTGAATCATCACCACCACAACAATAACAACAACAGTAATTGGGATTTTATTGAAGAGCTTATCCGAGCAGCTGATTGTTTTGACAGCAACCACCTTCAGCTTGCTCAAGCGATATTGGAGCGGCTCAACCAACGGCTTAGATCACCGTTGGGTAAACCGCTCCATAGAGCAGCGTTTCACTTCAAAGACGCTCTTCAGTCACTTCTGTCCGGTTCGAACCGGACAAATCCGCCACGGCTTTCTTCCATGGCGGAGATCGTGCAAATTATCAGAACCTTCAAGGCCTTTTCTGGAATTTCACCTATTCCAATGTTTTCCATCTTCACCACAAACCAAGCACTCCTTGAAGCACTACATGGATCTTCTTTCATGCATGTTGTTGATTTTGAAATAGGACTCGGAATCCAATACGCTTCTCTCATGAAAGAGATTGCTGAGAAGGTTGCCGGCAACAACTCCTCCACCCTCCTCCGCATCACCGCCGTCGTTCCTGAGGAGTATGCCGTTGAGAGCCGTCTAATCCGCGAGAATCTCAACCAGTTCGCGCAGGAGTTAGGGATCCGTGTCCAGGTCGACTTCGTTCCCCTTCGAACCTTCGAGACGGTGTCGTTCAAGGCAGTTAGGTTCGTCGATGGTGAAAAGACCGCCGTGCTGTTATCACCGGCTATATTCTGCCGTCTCGGCTCCGATGCCAGCACCGCCGCGTTTCTCGCGGAGGTACGGAGGATATCTCCGGGAGTGGTGGTGTTCGTAGACGGTGAGGGTTGGACGGAGGCTGCGTCGGCTGCGTCGTTTCGCCGCGCCGTGGTGAATAGTTTGGAATTTTACTCGATGATGCTGGAGTCGCTGGATGCGTCTGTTGTGACGGGGGGAGGGGGTGACTGGGCGAGGAGGATCGAGAACCTTCTTCTGCGGCCGAAGATCTTTGCGGCGGTGGAATCCGTCGGAAGAAGGACGACACCGTGGAGGGAGGCGTTTTACGGCGCCGGAATGAGGCCGTTGCAGTCAAGCCAGTTCGCGGATTTTCAGGCGGAATGTTTGTTAGCGAAGGTGCAAATCAGGGGCTTCCACGTGGCAAAACGACAAGCTGAGTTGGTCCTCTTCTGGCATGAAAGGGCCATGGTTGCCACGTCAGCTTGGCGGTGTTAG 1638 0.5067 MRVPVTSSPQANQKLTSNVVLQTPPPNNNNNPTTLCYEPTSVLDLCRSPSPEKKATVPKPEPEEHIELEDHVLPNLDWWESIMKDLGLHDDSSTPLLKTNTDNLNSNPCIPEIYPIPNTSHDPPFDHPPDFTTFSEIYSNQNLAYNYTTNTNTNTTLDHLVHDLNHHHHNNNNNSNWDFIEELIRAADCFDSNHLQLAQAILERLNQRLRSPLGKPLHRAAFHFKDALQSLLSGSNRTNPPRLSSMAEIVQIIRTFKAFSGISPIPMFSIFTTNQALLEALHGSSFMHVVDFEIGLGIQYASLMKEIAEKVAGNNSSTLLRITAVVPEEYAVESRLIRENLNQFAQELGIRVQVDFVPLRTFETVSFKAVRFVDGEKTAVLLSPAIFCRLGSDASTAAFLAEVRRISPGVVVFVDGEGWTEAASAASFRRAVVNSLEFYSMMLESLDASVVTGGGGDWARRIENLLLRPKIFAAVESVGRRTTPWREAFYGAGMRPLQSSQFADFQAECLLAKVQIRGFHVAKRQAELVLFWHERAMVATSAWRC* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03387 545 Pfam GRAS domain family 180 544 IPR005202 -
Rops2g03387 545 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 168 539 IPR005202 -
Rops2g03387 545 MobiDBLite consensus disorder prediction 1 34 - -
Rops2g03387 545 ProSiteProfiles GRAS family profile. 170 544 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03387 Rops-Chr2 62340589 62342635 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03387 65 544 GRAS Transcription Factor Family AT4G36710 55.419 2.05e-169 487
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Rops2g03387 GRAS 4.7e-84 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03387 - - cam:101510420 807.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03387 2 62340589 62342635 Rops2g03387 2 62340589 62342635 ECH
Rops1g01679 1 35412044 35414116 Rops2g03387 2 62340589 62342635 PCT