Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03374 ATGTCCGACTCATACCTGACTTTCTGTTTTCTTTCTTCAATTCCTGCTCTTATTATAATCTTCATTTTCTTCAAAAGAAAGAAACCAAGGCTTAATCTTCCCCCTGGCAACATGGGGTGGCCCTATCTTGGTGAAACAATTGGGTATTTGAAGCCTTACTCTGCTACCACAATAGGTGAATTTATGGAGAAGCACATAGCAAGGTATGGTACAATTTACAAGTCAAAATTGTTTGGTGAGCCAGCTATAGTCTCAGCAGATGCAGAGCTTAATAGGTTCATATTACAAAACGAAGGGAAATTGTTTGAGTGCAGCTATCCTAGAAGCATTGGTGGAATACTTGGGAAATGGTCTATGTTGGTCTTAGTAGGTGACATGCATAGGGACATGAGGAATATATCACTTAACTTTCTAAGCTATGCAAGGCTCCGAACACATCTATTGAAAGAGGTGGAGAAGCATACCCTTCTAGTTCTAAGCTCATGGAAAGAAAATTGTACATTCTCAGCTCAAGATGAAGCAAAGAAGTTCACGTTCAATTTGATGGCGAAACATATCATGAGCTTGGATCCTGGGAATCTAGAGACAGAACAACTGAAGAAAGAGTATGTCTCTTTCATGAAGGGTGTGGTATCTGCGCCTTTGAATTTTCCCGGAACTGCATATAGGAAAGCATTAAAGTCTAGGTCCACCATACTCAAGTTCATAGAGGGGAAAATGGAAGGAAGAATCAAGAGAAAGCAAGAGGGAAAAGAAAGTTTGGAGGATGATGATCTTCTAAACTGGGTTCTGATGCATTCAAATCTTTCTACTGAACAAATTCTTGACTTGATTCTGAGCTTGCTCTTTGCTGGCCATGAAACTTCATCAGTAGCTATAGCTCTAGCTATTTACTTCTTGCCCGGTTGTCCTCGAGCCATACAACAATTAACGGAAGAACACAGAGAAATAGTCAGATCCAAGAAGCAAGCAGGGGAGGTTGAATTAACTTGGGATGATTACAAAAGAATGGAATTCACTCACTGTGTTGTGAATGAAACACTTAGGCTGGGAAATGTGGTGAGGTTCCTTCACAGGAAGGCTCTCAAAGATGTTCGGTACAAAGGTTATGACATTCCATGTGGGTGGAAAGTTCTTCCAGTGATTTCGGCTGTGCATCTGGATCCTGCACTTTTTGACCAACCTCAACACTTCAATCCATGGAGATGGCAGAGTAATAATAAAACCGGAAGTTTCCCTGATACTAGCAATAACTTCATGCCATTTGGAGGAGGACCAAGGTTATGTGCTGGATCAGAGTTAGCCAAACTTGAAATGGCTGTTTTCATTCACCATCTAATCCTCAATTACCATTGGGAGCTGGTTGATGTTGATCAACCTGTAGCATACCCCTTTGTCGATTTTCCCAAAGGTTTATCCATCAGAGTCCAAAGACACTCTTTATAA 1446 0.4094 MSDSYLTFCFLSSIPALIIIFIFFKRKKPRLNLPPGNMGWPYLGETIGYLKPYSATTIGEFMEKHIARYGTIYKSKLFGEPAIVSADAELNRFILQNEGKLFECSYPRSIGGILGKWSMLVLVGDMHRDMRNISLNFLSYARLRTHLLKEVEKHTLLVLSSWKENCTFSAQDEAKKFTFNLMAKHIMSLDPGNLETEQLKKEYVSFMKGVVSAPLNFPGTAYRKALKSRSTILKFIEGKMEGRIKRKQEGKESLEDDDLLNWVLMHSNLSTEQILDLILSLLFAGHETSSVAIALAIYFLPGCPRAIQQLTEEHREIVRSKKQAGEVELTWDDYKRMEFTHCVVNETLRLGNVVRFLHRKALKDVRYKGYDIPCGWKVLPVISAVHLDPALFDQPQHFNPWRWQSNNKTGSFPDTSNNFMPFGGGPRLCAGSELAKLEMAVFIHHLILNYHWELVDVDQPVAYPFVDFPKGLSIRVQRHSL* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03374 481 CDD CYP90-like 65 478 - -
Rops2g03374 481 PRINTS E-class P450 group I signature 419 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03374 481 PRINTS E-class P450 group I signature 273 290 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03374 481 PRINTS E-class P450 group I signature 341 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03374 481 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03374 481 PRINTS E-class P450 group I signature 429 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03374 481 PRINTS E-class P450 group I signature 293 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03374 481 PRINTS E-class P450 group I signature 381 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03374 481 Gene3D Cytochrome P450 24 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03374 481 PRINTS P450 superfamily signature 420 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03374 481 PRINTS P450 superfamily signature 429 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03374 481 PRINTS P450 superfamily signature 284 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03374 481 PRINTS P450 superfamily signature 342 353 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03374 481 PANTHER CYTOCHROME P450 26 29 460 - -
Rops2g03374 481 SUPERFAMILY Cytochrome P450 30 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03374 481 Pfam Cytochrome P450 34 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03374 481 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 422 431 IPR017972 GO:0005506|GO:0016705
Rops2g03374 481 FunFam Cytochrome P450 90B1 23 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03374 Rops-Chr2 62083965 62089425 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03374 25 408 Cytochrome P450 AT3G50660 73.827 0.0 629
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03374 K09587 - gmx:100789515 849.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03374 2 62083965 62089425 Rops2g03374 2 62083965 62089425 ECH
Rops1g01654 1 34987462 34992101 Rops2g03374 2 62083965 62089425 PCT