Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03357 ATGGCATCATCTTGGACACCAAGGCAAAACAAACTATTTGAAAGAGCCCTGGCTATATATGATAGAGACACCCCAGATCGGTGGCAGAATATTGCCAACATGGTGGGAAAATCAGTAGAGGAGGTTAAAAGTCATTTTGAGATCCTCAAAGAAGATATCAGACGCATTGAGCACGGTCAAGTCGTTCTTGACCCAGAACCCAACAAAACTGAAGACTCATGA 222 0.4324 MASSWTPRQNKLFERALAIYDRDTPDRWQNIANMVGKSVEEVKSHFEILKEDIRRIEHGQVVLDPEPNKTEDS* 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03357 73 Gene3D - 2 63 - -
Rops2g03357 73 CDD SANT 4 50 IPR001005 -
Rops2g03357 73 SMART sant 1 52 IPR001005 -
Rops2g03357 73 FunFam Transcription factor SRM1 1 63 - -
Rops2g03357 73 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 3 66 IPR044636 GO:0003700
Rops2g03357 73 SUPERFAMILY Homeodomain-like 3 57 IPR009057 -
Rops2g03357 73 Pfam Myb-like DNA-binding domain 3 46 IPR001005 -
Rops2g03357 73 ProSiteProfiles SANT domain profile. 1 54 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03357 Rops-Chr2 61689090 61689760 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Rops2g03357 Myb_DNA-binding 1.3e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03357 - - pvu:PHAVU_003G254400g 113.62