Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03305 ATGGAATGGATGATAGGACTATTGGCTTTGATGGGTATCGTTTTATGTTGGTGGTTTCTGTGTTTGAAGGAGAATACTGTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGGAAAAGTTCCAAAAGGGAACACAGGTTGGCCTTTACTTGGAGAGACCCTTGATTTCGTTGCTTGTGGCTATACCTCTAAGCCTGTAAGCTTCATGGAAAAGCGCAAGTCTCTGTATGGTAATGTGTTTAAGACGAATATTTTGGGAACTGGTGTGATTGTATCAACAGACCCCGAAGTGAACAAGGTTGTTCTGCAGAACCAGGGGAACATATTTGTCCCTGCTTATCCAAAATCAGTTAGAGAGCTAATGGGAGAACACTCTATACTCCAAATGAATGGGAACTTGCATAGGAAAGTTCATGCGCTCCTTGGGGGGTTCCTTCGATCACCACAACTCAAAGCTCGAATCACTAGAGATATTGAGCACTCTGTCAAACAATGCTTTGCTACTTGGACCCACCAACCTATATACCTTCAAGATCAAGTCAAAAAGATTACGTTTACCATTTTGGTTAAAGTTCTGATGAGCATTGGTCCCGGGGAAGATTTAGATTTCTTGAAGAAAGAATTTGAAGAGTTCATCAAAGGGTTGATTTGCTTACCCCTCAACTTCCCAGGAACAAGACTACATAAATCCTTGAAGGCTAAGGAGAGAATGATGAAGATAGTGCAGAGGATAATAGAGGAAAGGAATAACAAAATGCATAAGAATAATAAGGATTCAGAGAAGGGTGGTGCAGCAAAAGATGTAGTGGATGTGCTCTTACGGGATAAAGGTGACTCCAACTCTGTAGCTAACCTGTCGTTGAAAAATATCAGCGAGAACATTATTGAGATGATGATACCTGGGGAAGAGACTCTTCCTACAGCTATGACCATGGCTGTCAAGTTTCTCAGTGATTATCCTGTTGCTCTATCCAAATTAGTGGAGGAGAACATGGAGTTGAAGAGGCGGAAGAATTGTTCAGATGAATACTCATGGACCGACTACCTGTCACTGCCATTTACTCAAAATGTTATCAGCGAAACTCTTAGAATGGCAAATATTGTCAATGCCATTTGGAGAAAAGCAGTCAAAGACGTAGATATTAAAGGGTACTTAATTCCTAAGGATTGGTGTGTTGTGGCATCTCTTACTTCTGTTCATTTGGATGGCATGAATTACGAAAACCCTTTTGAGTTTGATCCATGGAGATGGGAGAAAATTGGAACTGGGACTAGTAACCACTGTTTTACACCATTTGGTGGTGGACAGAGACTGTGCCCTGGGATAGAGCTCTCCCGGCTAGAGCTCTCTATTTTCCTTCATCATCTGGTTACCACATACAGGTGGGTTGCTGAGAAGGATGAAATTATTTACTTTCCAACAGTAAAGATGAAGAGGAAGCTCCCAATTAGTGTAATAGCCATTAACACCTGA 1479 0.4131 MEWMIGLLALMGIVLCWWFLCLKENTVKKKKKKKKKKKKGKVPKGNTGWPLLGETLDFVACGYTSKPVSFMEKRKSLYGNVFKTNILGTGVIVSTDPEVNKVVLQNQGNIFVPAYPKSVRELMGEHSILQMNGNLHRKVHALLGGFLRSPQLKARITRDIEHSVKQCFATWTHQPIYLQDQVKKITFTILVKVLMSIGPGEDLDFLKKEFEEFIKGLICLPLNFPGTRLHKSLKAKERMMKIVQRIIEERNNKMHKNNKDSEKGGAAKDVVDVLLRDKGDSNSVANLSLKNISENIIEMMIPGEETLPTAMTMAVKFLSDYPVALSKLVEENMELKRRKNCSDEYSWTDYLSLPFTQNVISETLRMANIVNAIWRKAVKDVDIKGYLIPKDWCVVASLTSVHLDGMNYENPFEFDPWRWEKIGTGTSNHCFTPFGGGQRLCPGIELSRLELSIFLHHLVTTYRWVAEKDEIIYFPTVKMKRKLPISVIAINT* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03305 492 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03305 492 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03305 492 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03305 492 PRINTS P450 superfamily signature 148 161 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03305 492 PANTHER CYTOCHROME P450 26 38 465 - -
Rops2g03305 492 SUPERFAMILY Cytochrome P450 38 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03305 492 CDD CYP90-like 74 485 - -
Rops2g03305 492 Gene3D Cytochrome P450 30 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03305 492 FunFam 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 31 490 - -
Rops2g03305 492 Pfam Cytochrome P450 43 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03305 492 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03305 492 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03305 492 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03305 492 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03305 492 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03305 492 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03305 492 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03305 Rops-Chr2 60614679 60624145 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03305 41 463 Cytochrome P450 AT3G13730 55.059 3.62e-170 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03305 K12637 - gmx:100812489 848.195