Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03302 ATGGAAATTTGTGGAGTAGAAGAGACCGTAGGAGAGTTGAGACAATACTTCAAAACTGGAAAAACAAGAAGTGTGACATGGAGGAAAAATCAGCTCAAGGCTCTCCTAGACCTTATTCATCACAAAGAAGATGCTATTTCTCAGGCTCTACACCAAGATCTTGGGAAGCACCCTGTTGAAGCTTTCCGTGACGAGATTGGAGGGGTAGAAAAATCAGCCAGCAACACTTTGAGCAGCGTTGAAAAATGGATGGCCCCTAAAAAGAGTCATCTTCCTTTCCTTTTCTTCCCAGCAAAAGGCGAACTGTTGTCAGAACCACTTGGTGTGGTTCTCATATTTTCTTCTTGGAACTTCCCAATAATGCTGGCATTGGATCCCTTAATTGGGGCAATATCTGCTGGAAATGTTGTAGTCATAAAACCATCAGAGCAAGCCCCAGCATGCTCTTCTTTTCTTGCCAATACCCTTCCTCAGTACTTGGACTCTAATGCCATCAAGGTGATTGAGGGTGGAGCAGATGTCTGTGAACAACTACTGCTACAGAAATGGGACAAAATATTCTTCACTGGAAATCCACGCGTGGCAAGCATAGTCATGTCTGCTGCTGCAAAGCATTTAACTCCAGTTACTCTAGAGCTGGGTGGAAAATGCCCTGCCATACTCGATTTCCTTTCCAGTCCTTCAGATTTTAAGTTCGCAGTCAAAAGAATCGTAGGAGGGAAATGGGGAACTTGTAGCGGACAGGCATGTATAGGAATTGACTATTTGCTTGTTGAGGAGAAGTTCTCATCTGATCTGATAGAACTATTAAAGAAGTTCATCAGAAAATTTTTTGGCGACAACCCTATCGAGTCAAAAGTAATTTCAAGAATAATAAACAGGCAGCACTTTGAGAGATTATGCAATCTTCTGAAAGACCCTCTTGTTGCAGCTTCCATAGTTCATGGGGGTTCAGTCGATGAAGAAAACCTGTACATTGAGCCCACAATCTTGTTAGATCCTCCACTAGATGCTCAGATAATGACAGAAGAAATCTTTGGCCCATTGCTTCCAGTGATCACAATGAATAAAATTCAAGAAAGTATTGAATTTATCAGTTCAAGGCCAAAACCTCTTACCATTTATGCCTTCTCCAAAAATGAAACTTTCAAGAGAAAGATTCTATCAGAAACGTCCTCAGGAAGTGTCGTATTTAATGACACACTGGTTCAATTTTTATGTGATACTCTACCATTTGGAGGTGTTGGCCAGAGTGGTATGGGACGGTACCATGGCAAATACTCCTTTGACACTTTCAGCCATGAAAAAGCTGTGATGCATAGAAACTTTTGCCTTGAAATTGAGCCAAGAAGGCTCTACACTTGGGAAGAGACTTTGTTGGGAAACCTACAAAGTCTGCTGGCATCTGTTAGGTTGATAAACGTTGGGGAGGATAGTTGGAAGTGGGTTTCGGATAGCTCGGGTGGCTACTCCTGCAAGTCAGCATACAAGGTGCTACAACAGTACTCTCCCAATTCAGTCCCGAGCTTGTCTCTGCCAGAGCTCAATTCTTTCCAAGATTTATGGGATGGTGAACTTTTGCAAGGTCTCTATGTAGATCAAAGTAAACAGATTGCTTCTAGTAATATGATTTAG 1635 0.4214 MEICGVEETVGELRQYFKTGKTRSVTWRKNQLKALLDLIHHKEDAISQALHQDLGKHPVEAFRDEIGGVEKSASNTLSSVEKWMAPKKSHLPFLFFPAKGELLSEPLGVVLIFSSWNFPIMLALDPLIGAISAGNVVVIKPSEQAPACSSFLANTLPQYLDSNAIKVIEGGADVCEQLLLQKWDKIFFTGNPRVASIVMSAAAKHLTPVTLELGGKCPAILDFLSSPSDFKFAVKRIVGGKWGTCSGQACIGIDYLLVEEKFSSDLIELLKKFIRKFFGDNPIESKVISRIINRQHFERLCNLLKDPLVAASIVHGGSVDEENLYIEPTILLDPPLDAQIMTEEIFGPLLPVITMNKIQESIEFISSRPKPLTIYAFSKNETFKRKILSETSSGSVVFNDTLVQFLCDTLPFGGVGQSGMGRYHGKYSFDTFSHEKAVMHRNFCLEIEPRRLYTWEETLLGNLQSLLASVRLINVGEDSWKWVSDSSGGYSCKSAYKVLQQYSPNSVPSLSLPELNSFQDLWDGELLQGLYVDQSKQIASSNMI* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03302 544 PANTHER ALDEHYDE DEHYDROGENASE 6 457 IPR012394 GO:0006081
Rops2g03302 544 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 215 418 IPR016163 GO:0016620
Rops2g03302 544 FunFam Aldehyde dehydrogenase 215 418 - -
Rops2g03302 544 Pfam Aldehyde dehydrogenase family 7 438 IPR015590 GO:0016491
Rops2g03302 544 PIRSF ALDH 2 477 IPR012394 GO:0006081
Rops2g03302 544 FunFam Aldehyde dehydrogenase 14 218 - -
Rops2g03302 544 SUPERFAMILY ALDH-like 6 446 IPR016161 GO:0016491
Rops2g03302 544 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 14 436 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03302 Rops-Chr2 60473813 60483721 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03302 6 450 Aldehyde Dehydrogenase Gene Family AT4G36250 60.225 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03302 K00128 - gmx:100809812 788.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03302 2 60473813 60483721 Rops2g03302 2 60473813 60483721 ECH