Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03295 ATGGATTTTCTTCTGCAAGCAAAAACCGCAACTGAACCATTCCTTACTATTCTCGTGTTAATCATCATCCCATTATTGCTTCTGGGTTTAGTGTCACGAATTCGTAGAAAGCCATCATACCCACCAGGACCAAAAGGCCTTCCCATTATAGGAAACATGAACATCATGGGAGAATTAACACACAGAGGTTTAGCAAACTTAGCAAAACAATACGGCGGCGTTTTGCACCTCCGCATGGGGTTCATCCACATGGTGGCGATTTCAAACGCAGAAGCAGCACGCCAAGTTCTCCAAATCCATGACAACATCTTCTCCAATCGACCAGCCACCATAGCCATAAGCTACCTCACTTACAACCGTGCTGACATGGCTTTCGCACATTACGGTCCCTTCTGGCGCCAGATGAGAAAGATCTGTGTCATGAAACTCTTCAGTCGCAAACGTGCTGAGTCGTGGAAATCCGTTAGGGAAGAAGTTGACGCCGTCATAAAAGCCGTTGGGGATAACGTCGGTAACCCCGTTAACGTTGGGGAACTGGTGTTTAATCTCACGAAGAATATTATCTATCGTGCTGCTTTTGGTTCTTGTTCGAACGAAGGCCAAGATGAGTTCATTGCTATACTTCAGGAGTTTTCCAAGTTGTTTGGAGCTTTTAACATCTCTGATTTTATTCCATGTCTCGGTTGGGTTGATCCGCAGGGTCTTAACGCCAGGCTGGTTAAGGCTCGAGGGGCACTGGATCGTTTCATAGATAAGATTATCGATGAACATGTGGAGAAGAGGAATATGAGTAACGGTGGTGGTGGTGGTGGTGGTGGTGAGGAAGATAGTGACATGGTTGATGAGTTGTTAGCTTTCTACAGTGATGAGGCTAAAGTGAATAATGAATCAGACGATCTGCAGAACTCCATCAAACTCACCAGGGATAACATCAAAGCCATTATAATGGACGTGATGTTTGGAGGGACAGAAACAGTGGCATCGGCGATAGAGTGGGCCATGGCAGAGTTAATGAGAAGCCCAAAAGACCTAAAGCGTGTGCAACAAGAACTCGCTGACGTGGTAGGCTTGGAGCGGCGCGTGGAGGAACCCGACATCGAACAACTCACCTACCTCAAATGCGCCATCAAGGAAATGCTGCGCCTCCACCCACCAATTCCCTTGCTCCTCCACGAGACGGCAGAGGACGCGGTGGTGAGTGGCTACTACGTCCCCAAAGGCTCGCGTGTGATGATAAACGCGTGGGCCATTGGTAGGGACAAGAACTCGTGGGAGGACCCTGAAACATTTAAGCCCTCACGGTTCTTGGACTCGAGCACGCCCGATTTTAAAGGAGGTAACTTCGAGTTCATTCCATTCGGGTCGGGTCGAAGGTCCTGCCCCGGGATGCAATTGGGTCTTTATACGTTGGACCTGACCCTAGCTCACTTGCTTCATTGCTTCACATGGGAGTTACCGAATGGGATGAAGCCCAATGAGATGGACACGAGTGACGTGTTCGGACTCACCGCTCCCAGGGCGAGTCGACTCATTGCGGTTCCCTCTAAGCGTTTGGTGTGCCCTCTTTGA 1569 0.4914 MDFLLQAKTATEPFLTILVLIIIPLLLLGLVSRIRRKPSYPPGPKGLPIIGNMNIMGELTHRGLANLAKQYGGVLHLRMGFIHMVAISNAEAARQVLQIHDNIFSNRPATIAISYLTYNRADMAFAHYGPFWRQMRKICVMKLFSRKRAESWKSVREEVDAVIKAVGDNVGNPVNVGELVFNLTKNIIYRAAFGSCSNEGQDEFIAILQEFSKLFGAFNISDFIPCLGWVDPQGLNARLVKARGALDRFIDKIIDEHVEKRNMSNGGGGGGGGEEDSDMVDELLAFYSDEAKVNNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMRSPKDLKRVQQELADVVGLERRVEEPDIEQLTYLKCAIKEMLRLHPPIPLLLHETAEDAVVSGYYVPKGSRVMINAWAIGRDKNSWEDPETFKPSRFLDSSTPDFKGGNFEFIPFGSGRRSCPGMQLGLYTLDLTLAHLLHCFTWELPNGMKPNEMDTSDVFGLTAPRASRLIAVPSKRLVCPL* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03295 522 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03295 522 PRINTS P450 superfamily signature 460 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03295 522 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03295 522 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03295 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Rops2g03295 522 Gene3D Cytochrome P450 33 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03295 522 Pfam Cytochrome P450 41 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03295 522 SUPERFAMILY Cytochrome P450 41 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03295 522 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03295 522 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03295 522 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03295 522 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03295 522 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03295 522 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03295 522 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03295 522 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03295 522 CDD CYP71-like 70 510 - -
Rops2g03295 522 PANTHER CYTOCHROME P450 84A1-RELATED 15 522 - -
Rops2g03295 522 FunFam Cytochrome P450 84A1 33 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03295 Rops-Chr2 60280644 60284451 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03295 48 522 Monolignol Biosynthesis Gene Families AT4G36220 74.105 0.0 751
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03295 K09755 - gmx:100807448 830.091