Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03286 ATGAGAAGAATAAAAGAGAAGACGGAAAGGGAAGAGGTTCTGCAATTGCATTATAGACAGAGAAAAGAGAGAGAAAGAATCTCTCTATGTTTTGGTGAATACGTAAAAGGTGCGTACCACTCTACTCCCTCTGTCTCTGCTAATGTGCGCTCAACCTGCACACACCCTAACCTTAACACCACACCTTCAGGGCCTCACTCTCCAAAACGAACTTCATCTTTCTTATCAATTTATCATTACAAACTCATTCCTCTGTTAAGGGCCATGCCTACTCTTCTTCTCTTCGTGCTAATGTGCGCACCCTTCTTATCATGTGTCCATTGCGGTTTCGTCACGGAGATCCAAGCCTTAACGTCGTTCAAGCTAGACCTCCACGATCCTCTCGGCACGCTCAACGGTTGGGACCCGTCAACGCCAACGGCTCCATGCGATTGGCGTGGCGTTTCATGCAAAAACGACCGAGTCACTGAGTTACTCTTGCCTCGCCTTCAACTCGGTGGCCGACTCAGTGACCGTATTTCAGACCTGCGTATGCTTCGTAGGCTGAACCTTCGTTCCAATTCCTTCAACGGTACAATTCCTCTTTCGCTTTCGAAATGCACGCTCCTACGTGTTGTGTTCTTGCAGGGAAATTCACTAGCCGGTGAACTCCCGCCGGAGATCGGAAACCTCGCCGGTCTTCAGTTTCTCAACGTTGCCGGAAACAGTCTCTCCGGCGGAATCCCCTTTGAACTCCCTCTTAGGCTGATGTATATTGACCTCTCTGCGAATGCCTTCTCCGGCGAGATTCCGAGCACCATTGCGAGTCTTTCTCAGCTTCAGTTTATCAACCTGTCGTACAACCAGTTCTCCGGTCAGATTCCTGCGAGAATCGGAGAGCTCCAGAAACTTCAATACCTCTGGCTTGACCACAACTTTCTCGGTGGAACCCTACCTTCGGCACTAGCCAATTGTTCTTCGCTCGTGCAGCTGAGCGTGGAAGGGAACAAACTCGCCGGAGTTTTGCCGGCGGCGATTTCGGCTCTGCCGAAGCTTCAGGTGTTATCCCTCGCGCAGAACAATCTCACTGGCTCTGTTCCGGCTTCCATTTTCTGCAACGTCTCTGTCAAAACGCCGTCGCTTCGAGTTGTTCAACTAGGGTTTAACGGTTTCACGGATTTCGCAGTGCCTGAGACAGCAACGTGTTTTAGCGCTCTTGAGGTTTTGAGGATTCAGCGCAATCGCGTGCGCGGCAAGTTTCCGTGGTGTTTCACCAATGTAACCACCTTGTCTGTGCTCGATGTTTCAGGCAATGCACTTTCGGGTGAGATTCCACCGGAAATAGGAAACCTCCAGAAACTGGAGGAGTTGAAGATGGCAGATAATTCATTATCCGGCGTGATTCCACCGGAGATTGAGAAATGTGGTTCCCTGCGTGTTGTTGATCTTGAAGGTAACCGTTTTTCTGGAGAAGTTCCTTCATTATTTGGTTATTTGACAGGGCTGAAGGTTCTTTCCCTTGGTGGGAATCACTTCTCTGGTTCGGTTCCAGTGAGTTTTGGTAAGCTTGCATCTCTTGAAACATTGAGTTTGAGGGGTAATAGCTTGAATGGTAGTATACCAGAGGAGTTAATGGGGTTGAGGAATTTGACAACACTGGACCTTAGTGGAAACAAGTTTTCAGGTCTTATTTCCGGGAGAATTGGGAATCTGAGTAGATTGATGGTTCTGAATCTGAGTTCCAATGGCTTCTCTGGAAAAATTCGTGCTAGTTTGGGGAATCTTTTCAGGTTAACTACACTTGACTTGAGCAAACAGAATCTCTCTGGTGAATTGCCATTTGAGCTTTTGGGGCTTCCGAGTCTGCAGGTTATTGCTCTGCAGGAGAATAAGCTATCTGGGGATGTTCCTGAAGGGTTTAGCAGCTTGACGAGTTTGCAATATGTGAACCTTAGCTCTAATGTGTTTTCCGGGCATATTCCTAAAAGTTATGGCTTTCTTCGATCATTGGTTGTTCTTTCATTGTCTGATAACCGCATTACAGGAATGATTCCTCCGGAAATTGGAAACTGTTCTGATATTGAAATCCTTGAGCTTGGATCAAATTCTTTGGCAGGTCCTATTCCCTCTGATCTCTCTGGCCTTGCCCATTTGAAAGTGCTTGATTTGAGTTGGAACAATTTATCTGGAGATATACCCGAGGATATCTCCAAATGCTCGTGGTTAAATGTTTTGTTAGCTGATCACAACCATCTTTCAGGTGCTATACCAGGGTCATTGGCAGAGCTATCAAACCTAACAATGCTGGACCTCTCTGCCAACAAATTGAATGGGGGAATCCCCAGTAATCTATCTGTGATCCATGGTTTGATGTACTTCAATGTCTCAGGTAATCACCTGGAGGGTGAGATACCCCCAATGTTGGGTTCTCGGTTCAATGACCCCTCTGTATTTGCAGATAATCAGAATTTATGTGGGAAGCCATTGGATAGGAAGTGCCAAGAGATAAATGATAGAGACAGAAAGAGGTTGATTGGGTTGATTATTATCATTACAGTTGGAGCTAGCTTGCTTATACTGTGTTGTTGTTTCTACATTTTAAGTCTATTAAGATGGCGCAAACGGCTTAAAGCAGCAGTATCTGGAGAGAAGAAAAAGAGTCCTAGGACAAGTTCTAGAACAAGTAGAAGTCGTGGCAGCACCGATAACGGTGGACCAAAACTTATCATGTTCAATACCAAAATCACACTTGCTGAGACAATCGAAGCAACAAGGCAATTCGATGAAGAGAATGTGCTGAGCAGAACAAGGTATGGATTAGTATTCAAAGCTTGCTACAACGATGGAATGGTTCTCTCCATTCGCAAGCTCCCTAATGGATCATTGGATGAAAACATGTTCAGAAAAGAAGCTGAATCACTAGGGAAAATCAAGCACAGGAACCTAACCGTTCTTAGAGGCTATTACGCTGGCCCACCAGACATTAGACTCCTAGCTTACGATTACATGCCGAATGGAAACCTCGCAACACTCCTCCAAGAGGCATCTCACCAAGATGGCCATGTTCTGAATTGGCCAATGAGACACCTCATTACACTAGGAATAGCACGTGGCATAGCATTTCTGCACCAATCTTCAATTGTCCATGGCGATTTGAAGCCACAAAATGTCCTCTTCGATGCAGATTTCGAAGCCCATTTATCAGATTTCGGGTTAGACCGGCTAACAGTAGTAACCAACCAAGTTGAAGCCTCCACTTCAACTACTTCAGTTGGCACATTGGGTTATGTTTCACCAGAAGCAGCGTTAACAGGGGAAGCCACGAAGGAATCTGACGTGTACAGCTTTGGAATTGTGATGCTGGAGCTTCTCACGGGAAAGAGACCAGTGATGTTCTCACAGGATGAGGACATAGTGAAGTGGGTGAAGAAACAGTTACAGAAGGGTCAAATTACTGAGCTACTAGAGCCTGGTTTACTTGAGCTGGACCCAGAATCATCAGAGTGGGAGGAGTTCTTGCTGGGTGTGAAAGTGGGCTTGCTTTGCACAGCACCAGACCCTCTTGATCGACCACCCATGTCTGACATCGTTTTCATGCTCGAAGGTTGCCGTGTTGGGCCTGATATACCATCCTCCGCTGATCCCACTACTCAAACTTCTCCGACATAA 3648 0.4633 MRRIKEKTEREEVLQLHYRQRKERERISLCFGEYVKGAYHSTPSVSANVRSTCTHPNLNTTPSGPHSPKRTSSFLSIYHYKLIPLLRAMPTLLLFVLMCAPFLSCVHCGFVTEIQALTSFKLDLHDPLGTLNGWDPSTPTAPCDWRGVSCKNDRVTELLLPRLQLGGRLSDRISDLRMLRRLNLRSNSFNGTIPLSLSKCTLLRVVFLQGNSLAGELPPEIGNLAGLQFLNVAGNSLSGGIPFELPLRLMYIDLSANAFSGEIPSTIASLSQLQFINLSYNQFSGQIPARIGELQKLQYLWLDHNFLGGTLPSALANCSSLVQLSVEGNKLAGVLPAAISALPKLQVLSLAQNNLTGSVPASIFCNVSVKTPSLRVVQLGFNGFTDFAVPETATCFSALEVLRIQRNRVRGKFPWCFTNVTTLSVLDVSGNALSGEIPPEIGNLQKLEELKMADNSLSGVIPPEIEKCGSLRVVDLEGNRFSGEVPSLFGYLTGLKVLSLGGNHFSGSVPVSFGKLASLETLSLRGNSLNGSIPEELMGLRNLTTLDLSGNKFSGLISGRIGNLSRLMVLNLSSNGFSGKIRASLGNLFRLTTLDLSKQNLSGELPFELLGLPSLQVIALQENKLSGDVPEGFSSLTSLQYVNLSSNVFSGHIPKSYGFLRSLVVLSLSDNRITGMIPPEIGNCSDIEILELGSNSLAGPIPSDLSGLAHLKVLDLSWNNLSGDIPEDISKCSWLNVLLADHNHLSGAIPGSLAELSNLTMLDLSANKLNGGIPSNLSVIHGLMYFNVSGNHLEGEIPPMLGSRFNDPSVFADNQNLCGKPLDRKCQEINDRDRKRLIGLIIIITVGASLLILCCCFYILSLLRWRKRLKAAVSGEKKKSPRTSSRTSRSRGSTDNGGPKLIMFNTKITLAETIEATRQFDEENVLSRTRYGLVFKACYNDGMVLSIRKLPNGSLDENMFRKEAESLGKIKHRNLTVLRGYYAGPPDIRLLAYDYMPNGNLATLLQEASHQDGHVLNWPMRHLITLGIARGIAFLHQSSIVHGDLKPQNVLFDADFEAHLSDFGLDRLTVVTNQVEASTSTTSVGTLGYVSPEAALTGEATKESDVYSFGIVMLELLTGKRPVMFSQDEDIVKWVKKQLQKGQITELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPPMSDIVFMLEGCRVGPDIPSSADPTTQTSPT* 1216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03286 1215 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 422 1193 - -
Rops2g03286 1215 SUPERFAMILY L domain-like 115 438 - -
Rops2g03286 1215 Pfam Leucine rich repeat N-terminal domain 113 150 IPR013210 -
Rops2g03286 1215 Gene3D Ribonuclease Inhibitor 336 434 IPR032675 -
Rops2g03286 1215 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 702 826 - -
Rops2g03286 1215 PRINTS Leucine-rich repeat signature 543 556 - -
Rops2g03286 1215 PRINTS Leucine-rich repeat signature 756 769 - -
Rops2g03286 1215 ProSiteProfiles Protein kinase domain profile. 920 1202 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03286 1215 Gene3D Ribonuclease Inhibitor 246 335 IPR032675 -
Rops2g03286 1215 SMART LRR_sd22_2 342 369 - -
Rops2g03286 1215 SMART LRR_sd22_2 540 566 - -
Rops2g03286 1215 SMART LRR_sd22_2 708 731 - -
Rops2g03286 1215 SMART LRR_sd22_2 660 686 - -
Rops2g03286 1215 SMART LRR_sd22_2 516 539 - -
Rops2g03286 1215 SMART LRR_sd22_2 420 446 - -
Rops2g03286 1215 SMART LRR_sd22_2 756 779 - -
Rops2g03286 1215 SMART LRR_sd22_2 294 320 - -
Rops2g03286 1215 Pfam Protein kinase domain 930 1149 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03286 1215 SUPERFAMILY L domain-like 390 660 - -
Rops2g03286 1215 SUPERFAMILY L domain-like 592 823 - -
Rops2g03286 1215 SMART serkin_6 920 1186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03286 1215 SMART LRR_typ_2 516 539 IPR003591 -
Rops2g03286 1215 SMART LRR_typ_2 612 635 IPR003591 -
Rops2g03286 1215 SMART LRR_typ_2 756 780 IPR003591 -
Rops2g03286 1215 SMART LRR_typ_2 444 468 IPR003591 -
Rops2g03286 1215 SMART LRR_typ_2 660 684 IPR003591 -
Rops2g03286 1215 SMART LRR_typ_2 540 563 IPR003591 -
Rops2g03286 1215 SMART LRR_typ_2 708 732 IPR003591 -
Rops2g03286 1215 SMART LRR_typ_2 176 200 IPR003591 -
Rops2g03286 1215 SMART LRR_typ_2 492 515 IPR003591 -
Rops2g03286 1215 SMART LRR_typ_2 342 366 IPR003591 -
Rops2g03286 1215 SMART LRR_typ_2 270 294 IPR003591 -
Rops2g03286 1215 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1040 1052 IPR008271 GO:0004672|GO:0006468
Rops2g03286 1215 FunFam Uncharacterized protein 342 558 - -
Rops2g03286 1215 Gene3D Phosphorylase Kinase; domain 1 883 995 - -
Rops2g03286 1215 MobiDBLite consensus disorder prediction 874 900 - -
Rops2g03286 1215 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 606 701 - -
Rops2g03286 1215 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 996 1201 - -
Rops2g03286 1215 Gene3D Transferase(Phosphotransferase) domain 1 996 1201 - -
Rops2g03286 1215 Gene3D Ribonuclease Inhibitor 540 830 IPR032675 -
Rops2g03286 1215 SUPERFAMILY Protein kinase-like (PK-like) 900 1202 IPR011009 -
Rops2g03286 1215 ProSiteProfiles Leucine-rich repeat profile. 710 732 IPR001611 GO:0005515
Rops2g03286 1215 Gene3D Ribonuclease Inhibitor 110 245 IPR032675 -
Rops2g03286 1215 Gene3D Ribonuclease Inhibitor 435 539 IPR032675 -
Rops2g03286 1215 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 110 268 - -
Rops2g03286 1215 FunFam Putative LRR receptor-like serine/threonine-protein kinase 883 995 - -
Rops2g03286 1215 Pfam Leucine rich repeat 494 553 IPR001611 GO:0005515
Rops2g03286 1215 Pfam Leucine rich repeat 590 647 IPR001611 GO:0005515
Rops2g03286 1215 Pfam Leucine rich repeat 661 721 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03286 Rops-Chr2 60122955 60126602 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03286 92 1215 Receptor kinase-like Gene Family AT4G36180 67.342 0.0 1449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Rops2g03286 Pkinase 3.3e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03286 - - gmx:100784869 1818.9