Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03283 ATGTTCAGTAAGTTAAGCCTTTCACCAGACGGGTTTGGACTGTTTGCTATCAACAACAAAAGAAGTATATGGGTTGAACACTTTTCGGGCTCTTCATCTAATGCATATGAGTTTATTGATATTCTAGGTGGGGAAGCAACATATCAAGAGTTGAGACAACTAGAAAATGATGGAGTCAACAAAGATGAGGTAGCGAGGGCCAAAGAAATAGCAGAGAGGAAATTTTCAGAAAGAGAATATGATGGTGCAAAGAAATTTGCTCTCAAGGCTCTAAATTTGTATCTTGATGTAGAGGATCTTTCCCAGTTTTTGACAACTCTTGATATTTATATTTCTGCTTTGAGTAAAGTAAGTGGAGAAATGGATTGGTATGGTATACTTGGAGTGAGTCCTTTTGCTGATGAGGATACTGTTAGAAAGCAATACAAGAAACTGGCTCTCACCCTTCACCCTAACAAAAACAAAACTTTAGGTGCAGAGGGTGCATTTAAGCTGGTTTCAGAGGCATGA 510 0.3843 MFSKLSLSPDGFGLFAINNKRSIWVEHFSGSSSNAYEFIDILGGEATYQELRQLENDGVNKDEVARAKEIAERKFSEREYDGAKKFALKALNLYLDVEDLSQFLTTLDIYISALSKVSGEMDWYGILGVSPFADEDTVRKQYKKLALTLHPNKNKTLGAEGAFKLVSEA* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03283 169 SMART dnaj_3 121 169 IPR001623 -
Rops2g03283 169 PANTHER BNAC03G44070D PROTEIN 60 169 - -
Rops2g03283 169 PRINTS DnaJ domain signature 124 142 IPR001623 -
Rops2g03283 169 PRINTS DnaJ domain signature 142 157 IPR001623 -
Rops2g03283 169 PRINTS DnaJ domain signature 158 169 IPR001623 -
Rops2g03283 169 CDD DnaJ 122 169 IPR001623 -
Rops2g03283 169 ProSiteProfiles dnaJ domain profile. 122 169 IPR001623 -
Rops2g03283 169 Pfam DnaJ domain 122 169 IPR001623 -
Rops2g03283 169 Gene3D DnaJ domain 109 169 IPR036869 -
Rops2g03283 169 SUPERFAMILY Chaperone J-domain 116 169 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03283 Rops-Chr2 60104014 60108720 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03283 52 169 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 32.258 2.58e-16 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03283 - - cam:101501612 189.504