Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03282 ATGGAGTCATGTGTCCCACCCGGGTTTCGGTTCCATCCAACAGATGGAGAGCTAGTTGGTTATTATCTGAGGAAGAAAGTAGCTTCTCAGAAGATTGAGCTTGACGTTATCAAAGAGATCGATCTATATCGTATTGAACCATGGGATCTCCAAGAGAGATGCTGGATTGGGAATGAGGAACAGAATGAATTGTATTTCTTTAGCCACAAAGATAAGAAATATCCAACAGGAACAAGAACCAACAGAGCTACCATGGCAGGGTTTTGGAAAGCAACAGGAAGAGACAAATCAGTGTACGAAAGGACAAAACTCATTGGTATGAGGAAGACCCTTGTTTTCTACAAAGGAAGAGCCCCTAATGGACAAAAAACTGATTGGATCATGCATGAGTATAGGCTTGAAACGGTAGAGAATGGACCTCCACATGAAGAAGGATGGGTTGTGTGCAAAGCATTCATAAAAAGAACTACCGGCCAAACAAAGACCACTGAAGGATGGGATCCAAGTTACTTATACAATGAACAAGCAAGTGGTGGTGCCAGCTCCATGGTGGACCCAAATGATCTCATCTTAAGGCAGCCTCAGAGGATTTTAGCTCAGAATTTCTTGTATAAGCAAGAGATAGAAACAGATACTTTAGGCTTCATGCATCCAGAACAATTGGTACAGCTTCCTCAGCTAGAAAGTCCCTGTTTGCCATTAGTAAAGAGACAAAGCTTAATATCAGAAAACAACGATGATGATCAAAATGGATTATCCAACACCAACAACAACACAGAGAAAGTGACTGATTGGAGGGCTCTTGACAAGTTTGTGGCTTCTCAATTGAGTCAAGACGACAGGCATGAAACAAATGGAGTTTCAAGCTTTGAAACCAGCTCAGACATGTCATTGCTGTTACTGCAGAGTAGTAGGGATGAAGGGAACAAGTTAAGCCCGTTTTTAAATGCAAGCTCAGACTGTGACTTCGGGATATGCGTATTTGAAAATTGA 993 0.4179 MESCVPPGFRFHPTDGELVGYYLRKKVASQKIELDVIKEIDLYRIEPWDLQERCWIGNEEQNELYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKSVYERTKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLETVENGPPHEEGWVVCKAFIKRTTGQTKTTEGWDPSYLYNEQASGGASSMVDPNDLILRQPQRILAQNFLYKQEIETDTLGFMHPEQLVQLPQLESPCLPLVKRQSLISENNDDDQNGLSNTNNNTEKVTDWRALDKFVASQLSQDDRHETNGVSSFETSSDMSLLLLQSSRDEGNKLSPFLNASSDCDFGICVFEN* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03282 330 Pfam No apical meristem (NAM) protein 6 133 IPR003441 GO:0003677|GO:0006355
Rops2g03282 330 SUPERFAMILY NAC domain 3 154 IPR036093 GO:0003677|GO:0006355
Rops2g03282 330 Gene3D NAC domain 14 158 IPR036093 GO:0003677|GO:0006355
Rops2g03282 330 ProSiteProfiles NAC domain profile. 5 154 IPR003441 GO:0003677|GO:0006355
Rops2g03282 330 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 2 253 - -
Rops2g03282 330 FunFam NAC domain-containing protein 14 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03282 Rops-Chr2 60078040 60080978 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03282 1 330 NAC Transcription Factor Family AT2G18060 58.696 1.93e-143 408
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Rops2g03282 NAM 4.6e-36 No_clan