Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03273 ATGGCAACTGGCGAAGAAAGTACTGAGAAAGAGCATCAGAAACATAGAGAAATGAGATTGCTTGAAGCATTTTATCCTCGTCTTTCTTCCATTCCTCCTAGCCCTTCTGTTTCTCTGGATGTAGAAGAGGAAGATTATGATGATAACAGTACTCCTCTCGTCCCTCTCATTCCCATTGAGGATCAAGAATCTATGGATATTGTGCCTGAATATACAGCAGCAGTGAACCCTCCTCCCAATGTGCAGTCCTCAGACGCATATGTAATGCCCTTATCTGGGGTATCATCTGGTTCAGAAGAAGACTTAGCCTCTGCAGTTGTTGCAACCATCTTGAAGACTAATGAGCAAGGAAGCTTAGTTGATATGGATCTGCTTTCTAAAATATTTAGTGACCCAATAATGATTGAGAATATGATTAATGTACTTAGAAGAATTATAGCGAACACTGGAAGTGCATCCTCCAATACTGTGGATGTAACCACTCCAGGATTGAAACCCGTTGTTCCATCATGTCTGTCGTCTACATCTACACCTGATGTGGCATCTTCTGAGGTTACACTCTCAAGTACAGTGAAGACTGCAATTCCATCAGTTTCAACGGAGACTGCTGCACATGATAAGCCAGCAACTACATCAGTTCCCTCGGTTTTTTTGCCTACATCTACACCTACACCTCATATATCGATTGGAATGCCAACTTCTTCAAATACCCAGCCACAGCAAGATACAGTTCTGGCATCTGAGGTGAAGGCAAGGACAGATTATTTAAAAAACCTCATTAGGCAACATGGTGCAGACAAGCAAGACTCACAAATAGGTATCCGTCACAGTAAACAAGGAGAAGTGAAACACAAAATCCAGAAACCATGCAAATACTTCAAAAGCTCAAAGGGGTGCCGGAATGGTTCTAACTGCCGCTATCTGCATGATGTGTCAGTTCAGTCGGGAGCGCAGAATGCAAATATATTGAAATTATAG 978 0.4223 MATGEESTEKEHQKHREMRLLEAFYPRLSSIPPSPSVSLDVEEEDYDDNSTPLVPLIPIEDQESMDIVPEYTAAVNPPPNVQSSDAYVMPLSGVSSGSEEDLASAVVATILKTNEQGSLVDMDLLSKIFSDPIMIENMINVLRRIIANTGSASSNTVDVTTPGLKPVVPSCLSSTSTPDVASSEVTLSSTVKTAIPSVSTETAAHDKPATTSVPSVFLPTSTPTPHISIGMPTSSNTQPQQDTVLASEVKARTDYLKNLIRQHGADKQDSQIGIRHSKQGEVKHKIQKPCKYFKSSKGCRNGSNCRYLHDVSVQSGAQNANILKL* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03273 325 SUPERFAMILY CCCH zinc finger 289 310 IPR036855 GO:0046872
Rops2g03273 325 MobiDBLite consensus disorder prediction 30 49 - -
Rops2g03273 325 Gene3D - 272 323 - -
Rops2g03273 325 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 1 321 - -
Rops2g03273 325 ProSiteProfiles Zinc finger C3H1-type profile. 285 312 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03273 Rops-Chr2 59826104 59827164 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Rops2g03273 zf-CCCH_4 5.4e-06 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03273 - - gmx:100783272 341.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03273 2 59826104 59827164 Rops2g03273 2 59826104 59827164 ECH