Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03252 ATGCTCTTATCTTCTTTTCCTTCACTTCTCACTACGACCACCACTTTCTCCGGCAAAACCGTCACCTCACCGTCGCGCCAAGTCAGATCCCGGCCAGTACTCGCCTTCGCCACCGCCACCGAGCAGAGGCCTTCGTATCTGAGTCATAACGGCATGGCTTCCTGCACAACGTCGTTTTACCAGATTCTTGGAATCGCCGCCGGCGCGTCAGACAAGGAGATTAAGGCGGCGTACCGGCGATTGGCGAGGATGTGTCATCCTGACGTGGCGGCGGTCGATCGGAAGGACTCGTCGGCGGACGAGTTCATGAAGATCCATGCTGCGTACTCCACACTATCGGATCCAGAGAAACGTGCCAGCTATGACAGAAGCTTGTTCCGGCGTCAGCGGCCGTTGACGATGACGGCGTCGAGATTTTCCGGTTACAGTGGCCGGAAATGGGAAACGGACCAGTGCTGGTAA 462 0.5693 MLLSSFPSLLTTTTTFSGKTVTSPSRQVRSRPVLAFATATEQRPSYLSHNGMASCTTSFYQILGIAAGASDKEIKAAYRRLARMCHPDVAAVDRKDSSADEFMKIHAAYSTLSDPEKRASYDRSLFRRQRPLTMTASRFSGYSGRKWETDQCW* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03252 153 ProSiteProfiles dnaJ domain profile. 58 125 IPR001623 -
Rops2g03252 153 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 17 153 - -
Rops2g03252 153 SMART dnaj_3 57 117 IPR001623 -
Rops2g03252 153 ProSitePatterns Nt-dnaJ domain signature. 102 121 IPR018253 -
Rops2g03252 153 SUPERFAMILY Chaperone J-domain 25 121 IPR036869 -
Rops2g03252 153 Pfam DnaJ domain 59 122 IPR001623 -
Rops2g03252 153 CDD DnaJ 59 114 IPR001623 -
Rops2g03252 153 PRINTS DnaJ domain signature 60 78 IPR001623 -
Rops2g03252 153 PRINTS DnaJ domain signature 97 117 IPR001623 -
Rops2g03252 153 PRINTS DnaJ domain signature 78 93 IPR001623 -
Rops2g03252 153 Gene3D DnaJ domain 47 142 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03252 Rops-Chr2 59482279 59482740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03252 52 122 C2H2 Transcription Factor Family AT1G74250 40.506 6.39e-09 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03252 - - cam:101494220 202.216