Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03244 ATGGATGTCTTGAATCGTGTCGTAAGTTATGCTTCTGGACTTCCATTGGCTCTGGTAGTAATAGGTTCCAACTTGTTTGGAAAGAGTATAGAAGAATGGAGATCTGCATTATGTCGGTATGAAAGCATTCCTAATAAAGAGATCCAAAAGATACTTAAAGTAAGCTTTGATGCCTTGGAGGAAGATCAACAAAGTGTGTTTCTTGATATTGCTTGTTGCTACAAAGGTAAAGGATTGGCAGAGGTCGAAGATATGCTTAATGCTCATTATGGTGACTGCATGAAATATCATATTGGAATGTTAGTTGAAAAATCTCTCATAAAGATTAGCTGGCATGATACAGTGACTCTACATGATTTGATAGAGGTCATGGGTAAAGAAATTGTTCGACAAGAATCAGTGAAAGAGCCTGGGAAACGCAGCAGGTTATGGTTCCATAAAGATATAATTCAAGTTTTAGAAGAAAATACGGGAACTAGTGCAATCGAAATCATATATCTATGGCTCCCCCTTCTTGAACAAGATGAAGTGGTAGAATTGAATGACACGGCCTTCAAGAAGATGACAAACCTTAAAACACTTGTTATTAGAAATGGTCAATTTTCCAATGGTCCTAAACATCTTCCAAGTAGTTTAAGAGTATTGGAGTGGTGGAGATATCCTTCAGAGTATTTACCATATGACTTTAATCCAAAGAAACTTGCCATATTTAAGTCACCCGAAAGTTGCTTGACATCATTCAAGTTGGCTGACTTATCAAAGGAATTGCATGAAGCTGGAAACACCATGTTTTGTTTGCCAGGGACAAAAATTCCAAATTGGTTTGAGCACCATAGCAAGGGAGGGTCAATTTCTTTTTGGTTTCGTAACAAGTTCCCAGCTATAGTTATGTGTCTTGTTACTACACCAATATTTATCAACCCTACAGTTATTCCCATCGTGATCATCAATGGCAATTACCATTTCTTCGACTCTGGGAATGGTCCTTATTTGTGGATAGAACCAAATCATACATATATTTTTGATTTGCAAAAGATAAACTTCAAAAATAATTTGGATGCAGCACTTTTAAAGAATGAATGGAACCATGCAGAAATTATATATAAGGACTGGAACGAGACCCCAATCCTTGCAGAGTATGGAATCCATATATTAAGACAGAAGACTAGCATGGAGAATATTAGATTCAGCAATCCTTATTGA 1203 0.3666 MDVLNRVVSYASGLPLALVVIGSNLFGKSIEEWRSALCRYESIPNKEIQKILKVSFDALEEDQQSVFLDIACCYKGKGLAEVEDMLNAHYGDCMKYHIGMLVEKSLIKISWHDTVTLHDLIEVMGKEIVRQESVKEPGKRSRLWFHKDIIQVLEENTGTSAIEIIYLWLPLLEQDEVVELNDTAFKKMTNLKTLVIRNGQFSNGPKHLPSSLRVLEWWRYPSEYLPYDFNPKKLAIFKSPESCLTSFKLADLSKELHEAGNTMFCLPGTKIPNWFEHHSKGGSISFWFRNKFPAIVMCLVTTPIFINPTVIPIVIINGNYHFFDSGNGPYLWIEPNHTYIFDLQKINFKNNLDAALLKNEWNHAEIIYKDWNETPILAEYGIHILRQKTSMENIRFSNPY* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03244 400 Pfam C-JID domain 266 354 IPR045344 -
Rops2g03244 400 SUPERFAMILY "Winged helix" DNA-binding domain 46 154 IPR036390 -
Rops2g03244 400 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 256 IPR044974 GO:0006952
Rops2g03244 400 Gene3D - 1 60 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03244 Rops-Chr2 59261696 59267702 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03244 48 265 WRKY Transcription Factor Family AT4G12020 37.281 2.60e-30 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03244 - - gmx:100780257 362.073