Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03243 ATGCCGACCGTGGCGGTGGTGGTCGACAGTGGGGTGGGCGGTGGTGACGACGGAGGCGATGGGCGACGATGGTGGTGGGTGTGGATGACGACGATGGTGATGTCAATGGCGACAGTGGCCGACGGTGGTGGTGACGGCGACGGTCGATGGTGGTGGCGACGCTTCAGAGGCCTAGATACTCGATATGGATTTACCGGCTATCTCTACAAAGCTTTTCATGACAAGGGTATCCTCACCTTCATTGACGATGTGGAGCTTCATAGAGGGCATGAAATCACACCTTCACTTTTGAAGGCAATTGAAGGATCCAGGATTGCCATCATTGTGCTCTCTAAAAACTATGCATCTTCTTCTTTTTGCTTAGATGAACTTGTCAAGATCATCGACTGTAATAAGGGAAATGGTCGGTTGGTTTGGCCGATCTTTTATGATGTAGATCCTTCTGATGTGCGAAAGTTGACAGGAGCTTATGGAGAAGCATTGGCTATGCTTAAGGAGAGGTTCAATGATAACATGGAGAGGTTTCATAAATGGAGGACAGCTCTGCAGCAAGTAGCTAACTTGTCTGGTTGGCATTTCAAAATTGGGGATGGATATGAGTACGAGTTTATTGAGAAGATCGTTGTAACTGTGTCTAGAAAGATTGAACGTGTTGCTTTACCTATTACTGATTACTCGGTTGGACTAGAGTCTCGCGTGCTAGAACTGAATTCGCTTCTTGATGTTGGGTGTGATGATGAAGTCCGCATCGTAGGGATCAATGGAATTGGTGGAATAGGTAAAACAACACTTGCTATGGCAGTTTATAATTTGATTGCTGATCATTTTGAAGGTTTATGTTTTCTTGAAAACGTGAGAGAAAACTCAAACAAACATGGCTTACAACATCTCCAAAAGATCCTTCTTTCACAAACACTTGGACAGAACAAAATTAAGTTAGCAAGTGTCAAACAAGGGATTTCAATAATACAACATAGACTCCAACAAAAGAAGGTTCTTTTGATTCTGGATGATGTTGACAAAGAAGAGCAATTGGAAGCCTTGGTTGGGGAATCTAATTGGCTTGGTTTTGGCAGTAGAGTTATTATTACAACTCGCGACAAACATTTGTTAGCAAGGCACAAGGTTAACATAACATATAAGTTAAAGAAGTTAAAATGA 1161 0.4298 MPTVAVVVDSGVGGGDDGGDGRRWWWVWMTTMVMSMATVADGGGDGDGRWWWRRFRGLDTRYGFTGYLYKAFHDKGILTFIDDVELHRGHEITPSLLKAIEGSRIAIIVLSKNYASSSFCLDELVKIIDCNKGNGRLVWPIFYDVDPSDVRKLTGAYGEALAMLKERFNDNMERFHKWRTALQQVANLSGWHFKIGDGYEYEFIEKIVVTVSRKIERVALPITDYSVGLESRVLELNSLLDVGCDDEVRIVGINGIGGIGKTTLAMAVYNLIADHFEGLCFLENVRENSNKHGLQHLQKILLSQTLGQNKIKLASVKQGISIIQHRLQQKKVLLILDDVDKEEQLEALVGESNWLGFGSRVIITTRDKHLLARHKVNITYKLKKLK* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03243 386 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 217 385 IPR027417 -
Rops2g03243 386 Gene3D - 53 211 IPR035897 -
Rops2g03243 386 Gene3D - 212 379 IPR027417 -
Rops2g03243 386 PRINTS Disease resistance protein signature 326 340 - -
Rops2g03243 386 PRINTS Disease resistance protein signature 250 265 - -
Rops2g03243 386 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 55 374 IPR044974 GO:0006952
Rops2g03243 386 Pfam TIR domain 54 215 IPR000157 GO:0007165
Rops2g03243 386 SMART till_3 55 188 IPR000157 GO:0007165
Rops2g03243 386 ProSiteProfiles TIR domain profile. 47 215 IPR000157 GO:0007165
Rops2g03243 386 FunFam Disease resistance protein (TIR-NBS-LRR class) 52 217 - -
Rops2g03243 386 SUPERFAMILY Toll/Interleukin receptor TIR domain 55 191 IPR035897 -
Rops2g03243 386 Pfam NB-ARC domain 236 377 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03243 Rops-Chr2 59259245 59261631 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03243 99 385 WRKY Transcription Factor Family AT4G12020 30.137 4.49e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03243 - - lja:Lj2g3v0620850.3 463.766