Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03242 ATGGCAGTGCCAACATCTTCCTGTTCCTTCTCCTATGATGTATTCCTCAGCTTTAGAGGCCTAGATACTCAACATGGTTTTACTGGCAATCTCTACAAAGCTCTTATTGATAAGGGAATCCACACCTTCATTGACGATGAGGTGCTACAGAGAGGGCAGGAAATCACACCTTCACTTTTGATGGCAATTGAAGGGTCCAGGATTGCCATCGTTGTGCTCTCTAAGAACTATGCATCTTCTTCATTTTGCTTAGATGAACTTGCCAAGATCCTTGGCTGCATTAAGGGAAAAGGTCCCAAACATCTTCCAAATAGTTTAAGAGTGCTGGAATGGTGGAGATTTCCTTCACAGTATTTACCATATGATTTTTATCCAAAGAAACTTGCCATATTGAAGTTACCCAAAAGTTACTTGACATCATTCAAGTTGGCTGACTTATCAATGAAGTTTGTGAATATGACAGTTTTGAATTTTGATGACTCAGAATGTTTAACTGAGATACCTGATGTATCTGCTCTCCCAAATTTAGAAGAATTTTCATTTGCAGATTGTGAGAATTTAGTTAGAATTCACAAGTCGGTTGGGTTCCTCAATAAACTTCAAATCTTGAATGCTTCAGGTTGTAGTGAGCTTAGGAGTTTTCCACCTATTAAGTTGATCTCCCTTGAACTACTCGATCTTACATTTTGCTCAAGTCTCGAGAAGTTTCCAGAAATATTAGGAAGGATGGAAAATATAACAATACTTACGTTGGAAGGAACTTCCATAAAAGAATTGCCATTTTCAATTCAAAATCTTACTCATCTTCGAAAATTAGAGCTGGGTTGTTGTGGAATGTTTAGGTTACCAAGTAGTATTGTCATGATGCCAAAACTGGTTGAGATTATTGGTAAGAGATGGGAAGGGTGGCTATCGCCAAAACAGGATGAGGGTGAAGAAAAAGTGAGCTCAATGACATCTTCAAATGTAGAATCTCTTGATCTCTCTTATTGCAATCTGTCAGATGAATCTTTTCTGATAGCTCTCACGTGGTTTGTTAATGTGAAAGAATTACTCCTACTGAATAATAATTTCACAATTCTTCCGGAATGCATCAAAGAATGTTTCTTTTTGAAAGTGCTTTATTTGGATTTATGCCGATATCTACGAGAAGTTAGAGGGATTGCACCAAACTTAAAATTTTTTTCAGCGCGACAATGCAAATCTTTGACTTGTACAAATATGTTACTGAATCAGCAACTGCATGAGGCTGGAAACACCAGGTTTTATTTGCCAGGATCAAAAATTCCAGATTGGTTTGAGCACCATGAGCATGGGAGGGTCACTATCATTCTGGTTTCGTAA 1344 0.378 MAVPTSSCSFSYDVFLSFRGLDTQHGFTGNLYKALIDKGIHTFIDDEVLQRGQEITPSLLMAIEGSRIAIVVLSKNYASSSFCLDELAKILGCIKGKGPKHLPNSLRVLEWWRFPSQYLPYDFYPKKLAILKLPKSYLTSFKLADLSMKFVNMTVLNFDDSECLTEIPDVSALPNLEEFSFADCENLVRIHKSVGFLNKLQILNASGCSELRSFPPIKLISLELLDLTFCSSLEKFPEILGRMENITILTLEGTSIKELPFSIQNLTHLRKLELGCCGMFRLPSSIVMMPKLVEIIGKRWEGWLSPKQDEGEEKVSSMTSSNVESLDLSYCNLSDESFLIALTWFVNVKELLLLNNNFTILPECIKECFFLKVLYLDLCRYLREVRGIAPNLKFFSARQCKSLTCTNMLLNQQLHEAGNTRFYLPGSKIPDWFEHHEHGRVTIILVS* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03242 447 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 93 IPR044974 GO:0006952
Rops2g03242 447 Gene3D - 9 112 IPR035897 -
Rops2g03242 447 SUPERFAMILY L domain-like 102 409 - -
Rops2g03242 447 ProSiteProfiles TIR domain profile. 10 137 IPR000157 GO:0007165
Rops2g03242 447 Pfam TIR domain 12 95 IPR000157 GO:0007165
Rops2g03242 447 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 135 IPR035897 -
Rops2g03242 447 Gene3D Ribonuclease Inhibitor 125 235 IPR032675 -
Rops2g03242 447 SMART till_3 11 134 IPR000157 GO:0007165
Rops2g03242 447 Gene3D Ribonuclease Inhibitor 236 420 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03242 Rops-Chr2 59232396 59236431 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03242 97 292 WRKY Transcription Factor Family AT4G12020 36.408 3.73e-22 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03242 - - gmx:100814962 417.157