Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03228 ATGGGAAACATTAGGAATAGAAACATGAAGTCACTCTTTCAAAAGCTTCTTTCTCAATGGCCTCTAGTCATTCTTTGGTGTTCTGCCATAGCCATCATCTTTCAAAAACATGTTTCTGCTGTAAGTCTACCAAACAATGAAACAGTTCCAGCAGTGTTTGTATTCGGGGACTCTATAGTAGATACGGGAAACAACAACTATATCAAAACAATTGTCAAATGCGATTTCCCACCTTATGGTAGAGACTTTGCTGGAGGAAATCATCCAACTGGGAGGTTCAGCAATGGCTTAGTCCCATCAGACATCATTGCTGCAAAATTTGGGGTCAAGAAGCTTTTACCTGCTTATCTTGATCCAAATTTGCAACTTCAAGATCTACTCACTGGTGTAAGCTTTGCTTCAGGTGGTGCTGGATATGATCCTCTAACATCTGAATTAATGTCTGTGATATCATTATCAGATCAACTAGACATGTTCAAGGAGTACATAAAGAAGATAAAGGAAGCAGTTGGAAGAAACAGAATGGAGATAATAGTATCTAAGAGCATATACATTATATGCATAGGAAGTGATGACATTGCCAATACTTATGATCAAACACCGTTTAGGCGTGCCCAGTATGATATTCCATCATACACGGACTTTATGGCTTCAGAAGCCTCAAACTTCTTGCAGGAACTTTATGGACTAGGAGCTAGAAGGATTGGAGTATTCAGTATACCAGTTATAGGGTGTGTTCCCTCACTAAGAACAATTCGTGGAGGCATCTGGAGAGCATGTTCAGATTCTTCCAACCAAGCAGCATTACTCTTCAATTCGAAGCTCTTCTCCCAAATGGGTGCACTTCAAAAAAGGTTTTCAGACGCTAGGCTTGTCTATCTTGAATCTTACAACTCACTGCTGCACATGATTCAAAACCCTGGTAACTATGGTTTTAAAGAGACGGAGAAAGGATGCTGTGGCACAGGGAAAATAGAAGCCAGCATTTTGTGCAACCCTTTCAGCATAAACACATGCTCAAATTCTTCAAACTACATATTCTGGGATAGTTATCATCCCACAGAGAAGGCTTATAATGTGCTTAGTTCTCTAGTGCTTGATAACAAAGTCAAGGACTTCTTCTGA 1125 0.3991 MGNIRNRNMKSLFQKLLSQWPLVILWCSAIAIIFQKHVSAVSLPNNETVPAVFVFGDSIVDTGNNNYIKTIVKCDFPPYGRDFAGGNHPTGRFSNGLVPSDIIAAKFGVKKLLPAYLDPNLQLQDLLTGVSFASGGAGYDPLTSELMSVISLSDQLDMFKEYIKKIKEAVGRNRMEIIVSKSIYIICIGSDDIANTYDQTPFRRAQYDIPSYTDFMASEASNFLQELYGLGARRIGVFSIPVIGCVPSLRTIRGGIWRACSDSSNQAALLFNSKLFSQMGALQKRFSDARLVYLESYNSLLHMIQNPGNYGFKETEKGCCGTGKIEASILCNPFSINTCSNSSNYIFWDSYHPTEKAYNVLSSLVLDNKVKDFF* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03228 374 CDD SGNH_plant_lipase_like 50 368 IPR035669 -
Rops2g03228 374 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 52 63 IPR008265 GO:0006629|GO:0016298
Rops2g03228 374 Gene3D SGNH hydrolase 37 370 IPR036514 -
Rops2g03228 374 PANTHER GDSL ESTERASE/LIPASE EXL3 31 363 - -
Rops2g03228 374 Pfam GDSL-like Lipase/Acylhydrolase 52 364 IPR001087 GO:0016788
Rops2g03228 374 FunFam GDSL esterase/lipase APG 41 370 - -
Rops2g03228 374 SUPERFAMILY SGNH hydrolase 51 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03228 Rops-Chr2 59021313 59026827 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03228 46 369 Pollen Coat Proteome AT1G75910 40.854 1.59e-74 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03228 - - gmx:102668883 599.356