Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03206 ATGTCCAAGTCATCGCAACAAGAATCACAAATAGGTGATTATTCCAAAGATCCCTTAGAAAATGTCCAAAATTGGGCAGACAATGCATGGCAACTCACAGCAGCAACCTTAGTGGGCCTTCAAAGTGTTCCTGGGCTTGTGTTTCTCTATGGTAGCATGGTTAAGATAAAATGGGCCGTTAATTCTGCTTTCATGGCCCTATATGCTTTTGTTGCTGTTCTCATTTGTTGGGTTTTGTGGGCCCACCGAATGGCATTTGGCACCAAGCTTATGCCAATTGTTGGAAAGCCCAACCATGCTCTGACTGAGAAGTTTCTCCTTGCCAAGTCATCAACAAATGATTATTTTTCAATGGCTGACTTTGTATTCTATCAATTTGCTTTTGCTGCAATTACTGTTGTGTTGCTTGCAGGGTCTTTGCTTGGGAGGATGAATTTCTATGCATGGATGCTGTTTGTCCCACTTTGGCTTACATTGTTTACACCATTGGTGCCTTCAGCATATAGGGCCAATGGCTTCCTTGAACAAAAAATAATTGATTATGCTGGTGGCTTTGTGATTCATCTATCTTCTGGTGATGCAGGTTTTAATGGTGGAGCTCCATTCCAAGCAGGAGAGATTGCATCCTTGGCCATCTTCAACACCCATCTATGCACTGCCACAAGCCTAATTGTTTGGCTTTCCCTTGATATGATTATGTATCAAAAGAGTTCAGTGATAGGTGCTATACAGGGAATGATGACTGGCCTCGTTTGCATCACCCCTGGTGCAGGTTTGGTGGATTCATGGGCAGCAATTTTGATGGGAGCTTTGTCTGGTTCGATTCCATGGTACACCACGATGGTTTTGCACAAGAAAGCAGCATTCTTTCAAAGTGTGGATGATACATTAAGTGTCTTTCACACTCATGCTGTGGCTGGTTTTCTAGGAGGACTTCTTTCTGGTGTGTTTGCCAAACCCAACACTTTGAGGATACTATATGGCCCTGGAATGCCTTATGGCCCAGGCTTATTCTACAGCTTTTATGAAGGGGAAGTGGGTCAAGGGTTCAAGCAAATGGGGTACCAGTTACTAGGAGCAGCTTTTGTTACTGTTTGGAATGTGGTTGTTACTAGCCTCATCAGTATTCTTATAAGCCACATTGTGGATCTTAGGATGCAAGAAGAGGACCCAGAGGTTGGTGATGATGTTGTTCATGGGGAAGAAGCTTATGCATTGTGGGGTGATGAAGAGAGAATGAGAGTCCCTCTTCGTCTTCATATAAGTCCAACAATTCCGTCCATTTGCCGACAAAGGTTCTCAATTCCTGTCACTTGA 1317 0.4358 MSKSSQQESQIGDYSKDPLENVQNWADNAWQLTAATLVGLQSVPGLVFLYGSMVKIKWAVNSAFMALYAFVAVLICWVLWAHRMAFGTKLMPIVGKPNHALTEKFLLAKSSTNDYFSMADFVFYQFAFAAITVVLLAGSLLGRMNFYAWMLFVPLWLTLFTPLVPSAYRANGFLEQKIIDYAGGFVIHLSSGDAGFNGGAPFQAGEIASLAIFNTHLCTATSLIVWLSLDMIMYQKSSVIGAIQGMMTGLVCITPGAGLVDSWAAILMGALSGSIPWYTTMVLHKKAAFFQSVDDTLSVFHTHAVAGFLGGLLSGVFAKPNTLRILYGPGMPYGPGLFYSFYEGEVGQGFKQMGYQLLGAAFVTVWNVVVTSLISILISHIVDLRMQEEDPEVGDDVVHGEEAYALWGDEERMRVPLRLHISPTIPSICRQRFSIPVT* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03206 438 Gene3D Ammonium transporter AmtB like domains 194 408 IPR029020 -
Rops2g03206 438 PANTHER AMMONIUM TRANSPORTER MEP2 194 412 IPR001905 GO:0008519|GO:0016020|GO:0072488
Rops2g03206 438 Pfam Ammonium Transporter Family 195 404 IPR024041 GO:0008519|GO:0016020|GO:0072488
Rops2g03206 438 Pfam Ammonium Transporter Family 29 196 IPR024041 GO:0008519|GO:0016020|GO:0072488
Rops2g03206 438 Gene3D Ammonium transporter AmtB like domains 3 193 IPR029020 -
Rops2g03206 438 SUPERFAMILY Ammonium transporter 24 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03206 Rops-Chr2 58695789 58699054 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03206 118 412 Inorganic Solute Cotransporters AT2G38290 49.552 2.71e-100 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03206 K03320 - gmx:100815876 648.662