Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03182 ATGGTTAATTCTAATGAGAACAATTCCAACTCCATCATGCCCAGAAATTTCCAAGGAGGGGTGAATCAAACAGGTACCAAAATGGTTGGAACCAACAGAAGAACTCTTAGCAACATTGATCAGAATCTTGTGCAAGGTCGACCATACCCTTGTGTTGTTAACAAGAGGGTGTTGTCAGAAAAACATGAGGTTTGTGAAAAGAAGCAGGTGGATCCAGTGCATCGACCCATCACAAGGAGGTTTGCTGCACAAATCGCTAACAAGTCAAACCCATCAATTTCAAATTTGAATGGGTTTGGAAGCTCTATATTCATTGATGATGAACACACGTCACTGGCAGACCAACCAGTGCCAATGTCTTTGGAGCAAACAGAGCAAATGCATAGTGATCCAGATCAGATGGAGGAAGTTGAGATGGAGGATATGGTTGAAGATATTTTGGACATTGATAGCTGTGATGCAAATAACCATCTTGCAGTGGTGGAATATCTTGAAGATCTTCATTCTTACTACAGAAAAGTGGAGAATATTGGCTGTGTTCCACCCAGTTATATGGAACAACAATTTGACATTAATGAAAGGATGCGGGCGATACTAATTGATTGGCTTATTGAGGTGCACGACAAATTTGACCTCATGCAAGAGACATTGTTTCTTACAATTAATCTCATAGACAGATTCTTGTCTAAGCAAACAGTGGTGAGAAAGAAGCTTCAGTTGGTTGGACTAGTTGCCATGCTTTTGGCATGCAAGTATGAGGAAGTTTCTGTGCCCGTGGTCGGGGATCTAATCCATATCTCGGACAAAGCATACACGAGGAACGAAATTCTGGAAATGGAGAAGTTGATTCTCAATACATTGCAGTTTAATATGTCTGTGCCAACTGCATATGTTTTTGTGAGAAGATTTCTGAAGGCAGCTCAAGCAGACAAAAAACTTGAGCTACTGGCCTTTTTCTTAGTAGAGCTATCTCTGGTGGAATATAAGATGCTGAAGTTCCCACCATCCATGCTAGCAGCAGCTGCTGTCTACACAGCTCAATGCACTCTCAATGGTTTCCAACAGTGGAGCAAGACATGTGCATGGCATACAAACTACTCAGAAGATCAACTATTAGAGTGCTCTAGTCTGATGGTTGGGTTCCACCAGAAGGCTGGGACAGGGAAACTGACTGGGGTGCATAGGAAGTATTGCTCATCTAAATTTCGCTATACTGCCAAATGTGAACCAGCAAGCTTTCTTGTGGATAACCAGTTGTAG 1260 0.4206 MVNSNENNSNSIMPRNFQGGVNQTGTKMVGTNRRTLSNIDQNLVQGRPYPCVVNKRVLSEKHEVCEKKQVDPVHRPITRRFAAQIANKSNPSISNLNGFGSSIFIDDEHTSLADQPVPMSLEQTEQMHSDPDQMEEVEMEDMVEDILDIDSCDANNHLAVVEYLEDLHSYYRKVENIGCVPPSYMEQQFDINERMRAILIDWLIEVHDKFDLMQETLFLTINLIDRFLSKQTVVRKKLQLVGLVAMLLACKYEEVSVPVVGDLIHISDKAYTRNEILEMEKLILNTLQFNMSVPTAYVFVRRFLKAAQADKKLELLAFFLVELSLVEYKMLKFPPSMLAAAAVYTAQCTLNGFQQWSKTCAWHTNYSEDQLLECSSLMVGFHQKAGTGKLTGVHRKYCSSKFRYTAKCEPASFLVDNQL* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03182 419 Gene3D - 166 406 - -
Rops2g03182 419 SMART cyclin_7 201 285 IPR013763 -
Rops2g03182 419 SMART cyclin_7 298 380 IPR013763 -
Rops2g03182 419 SMART Cyclin_C_2 294 411 IPR004367 -
Rops2g03182 419 Gene3D - 180 292 - -
Rops2g03182 419 MobiDBLite consensus disorder prediction 1 22 - -
Rops2g03182 419 CDD CYCLIN_AtCycB-like_rpt2 294 410 - -
Rops2g03182 419 Pfam Cyclin, C-terminal domain 294 409 IPR004367 -
Rops2g03182 419 SUPERFAMILY Cyclin-like 293 411 IPR036915 -
Rops2g03182 419 PANTHER CYCLINS 128 389 IPR039361 -
Rops2g03182 419 CDD CYCLIN_AtCycB-like_rpt1 146 289 - -
Rops2g03182 419 SUPERFAMILY Cyclin-like 155 291 IPR036915 -
Rops2g03182 419 Pfam Cyclin, N-terminal domain 167 292 IPR006671 -
Rops2g03182 419 FunFam G2/mitotic-specific cyclin-1 282 406 - -
Rops2g03182 419 ProSitePatterns Cyclins signature. 196 227 IPR006671 -
Rops2g03182 419 PIRSF Cyclin_A_B_D_E 2 419 IPR046965 GO:0016538|GO:0044772
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03182 Rops-Chr2 58073341 58076997 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03182 1 415 Core Cell Cycle Gene Families AT1G20610 56.452 4.47e-174 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03182 K21777 - gmx:100798068 636.721