Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03175 ATGGGTCTCTGTTTTTCTTTTCTCTCTTCCTCTGCACCTGATTCCTCTTCTTCCCTCAACAACAAGCCTCAATTCTCAGGTTCAGCATCAGCAAGCACTGATGTGGGGTTCTCAGCAACTACAAGCAGTGCAGAGAAGAGCCAATTTTCTGAGATTGCAAGTGGAAGTTTTGATGGTGAAGGGTCTCTTCCTTTTCCTTCTCCTGATGGTCAGATTCTAGAAAGGCCAAATTTGAAGGTGTTCAGTTTTGTGGACTTGAAATCTGCTACAAAGAGTTTCAAATCCGATACATTGCTTGGTGAAGGTGGTTTTGGAAGAGTTTACAAAGGTTGGTTGGATCAGAAGACCCTCACACCAGCCAGAGCAGGGTCTGGAATGGTGGTTGCTATCAAAAAGTTGAACCCTGAAAGCACGCAAGGATTTCAAGAATGGCAGTCAGAAGTCAACTTTTTAGGAAGACTTTCTCACCCCAACCTGGTCAAGCTATTGGGTTATTGTTGGGATGATGATGAACTTCTTTTGGTGTATGAGTTCATGCCAAAGGGAAGCCTAGAGAATCATCTCTTCAGAAGAAATCCTAACATAGAACCACTTTCTTGGAACACCCGAATGAAAATAGCTATTGGTGCTGCTCGGGGCTTGGCTTTCTTGCACACTTCTGAAAAGCAAGTCATATACAGAGATTTCAAGGCCTCAAATATACTACTAGATGGGAATTACAATGCCAAAATCTCAGATTTTGGGTTGGCTAAATTGGGGCCTTCTGGGGGAGAATCACATGTGACAACCAGGGTCATGGGCACGTATGGTTATGCTGCTCCAGAATACATTGCAACAGGCCACTTGTATGTGAAGAGCGACGTGTATGGTTTTGGTGTAGTGCTGCTTGAAATGCTGACAGGCATGCGAGCACTGGATACTAAACGACCAACAGGGCAACACAACCTGGTTGAATGGGTGAAGCCTTGTCTCTCCAACAAGAAAAAGTTGAAAACCATTGTGGATGCTAAGATAGAAGGTCAATATTCACCAAAAGCAGCATTACAAGCAGCACAACTCACTCTAAAATGTCTAGATTCTGACCATAGGAACCGTCCTTCTATGAAAGATGTGGTTGAGATATTGGAAGGAATTGAAGCCATTCAGGTCAAATCCAAGAACCCCAATTCTCATCAACCTCCACTTCATGCTAGGAAGAGAGTTATAAGAGTATAA 1215 0.4346 MGLCFSFLSSSAPDSSSSLNNKPQFSGSASASTDVGFSATTSSAEKSQFSEIASGSFDGEGSLPFPSPDGQILERPNLKVFSFVDLKSATKSFKSDTLLGEGGFGRVYKGWLDQKTLTPARAGSGMVVAIKKLNPESTQGFQEWQSEVNFLGRLSHPNLVKLLGYCWDDDELLLVYEFMPKGSLENHLFRRNPNIEPLSWNTRMKIAIGAARGLAFLHTSEKQVIYRDFKASNILLDGNYNAKISDFGLAKLGPSGGESHVTTRVMGTYGYAAPEYIATGHLYVKSDVYGFGVVLLEMLTGMRALDTKRPTGQHNLVEWVKPCLSNKKKLKTIVDAKIEGQYSPKAALQAAQLTLKCLDSDHRNRPSMKDVVEILEGIEAIQVKSKNPNSHQPPLHARKRVIRV* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03175 404 MobiDBLite consensus disorder prediction 8 37 - -
Rops2g03175 404 PANTHER OS01G0588500 PROTEIN-RELATED 37 379 - -
Rops2g03175 404 ProSitePatterns Protein kinases ATP-binding region signature. 99 132 IPR017441 GO:0005524
Rops2g03175 404 Pfam Protein tyrosine and serine/threonine kinase 96 375 IPR001245 GO:0004672|GO:0006468
Rops2g03175 404 FunFam Serine/threonine-protein kinase BIK1 62 178 - -
Rops2g03175 404 ProSiteProfiles Protein kinase domain profile. 93 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03175 404 Gene3D Phosphorylase Kinase; domain 1 77 178 - -
Rops2g03175 404 CDD STKc_IRAK 99 378 - -
Rops2g03175 404 FunFam Serine/threonine-protein kinase PBS1 179 393 - -
Rops2g03175 404 SUPERFAMILY Protein kinase-like (PK-like) 71 376 IPR011009 -
Rops2g03175 404 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
Rops2g03175 404 Gene3D Transferase(Phosphotransferase) domain 1 179 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03175 Rops-Chr2 57943121 57947497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03175 69 375 Glycoside Hydrolase AT3G07070 50.325 1.67e-104 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Rops2g03175 PK_Tyr_Ser-Thr 5.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03175 - - gmx:100794193 653.669