Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03168 ATGGAAGGCTTTTTGCACACTTTTGAGTTCAATCAGGGGAAGATGGCCAAGAAAGTTCATGCACATAAGAGACAAAATGGTGGCCTGGAAACTTATCGAGATAGCATGGAGCTGCAAGTAGAAACATCTAGGATCCACTATCCAGAAGGAGAGTCACCATACTCTTCTCAAGTAGAAGATGGACGGTCAAAGAATAATAGCTACTCAAATGTGGGTTCAGTGAGAAAGCAGAACGATGAGGAGTTATCCAAACAATCAGGCCCCAGAAATAATGCACCAAGCCTTGTGGCAAGGTTGATGGGGTTAGACATGATGCCATTAGACACTAAATCTGTTATTCTATCAGATGAAAGGAGCATAAGTGAAAATATGGAGAGGAAGTTTTCAAAGAAGGGAATGAACAAAAGGGGATCATTTGGTAGGGGTTCCTCCAACTTTAACAATTATAACCAAACGAAATTTAATTCATTTTATCAAGACTTTGATGATGAAGGAAGGGGACAGAATTTTGGAGAACCAAGGCAAAGGGAACATCCTCAGGAAGAGGAACTCCAGGAATTCAAGAAAGAATTTGAAGCATATCAAGCAGCAAGGCTCAAGGAGTGTTTGAAGGTTGTTGAAATTGGAAATGCATCTAGGCAAATGCTTGCTCAAGAGAACCTGGACAAGGAAAAGGTACTACATGATGCAAGTTCACAAAGAGAGGCAAGCCACTCATCTGAAACAAAGCTACCTAATAGTGATATGATGGAGTCAATCTCAACTAAGCTGAAAGAATCTTATCATTCAAAGAGTAGAACGCCATGTAGAGACTTTGAGGAGTCTCTAATGATGAAATCTAGAAGCAGATTAGATATATGTTCTTCTCACACTCAGATAGTTACCTTGAAGCCTGGTATTAATAGAATTTGCAATTGCAACCATGAAGAGAATTGGATCAGTTCATCAGATACTTTACAAGGGAGAAATAGTATAGAAGATTTTCTTGATGAGGTGAGAGAGCGGTTGAATTGTGAGCGGCAAGGGAAAACTGTCAAAAAGGGTTTTGTGGGTCCAGGAAATGGAATTGATACAACTTACCATGAAAAAGCATCTGGTCCTAAAGAAATAGCTCATCATGTAGCAAAAGAGGTAATAAGAGAAAGTGTGACTATAGATGCTGAAGAAAATTTACACAGCTCAGAATCAACAAGATCCCAAAAACAACAACAAAAGCCTTTTCCCATTAAGTGGAGTCGGCTACCAGAATTTTTCAGCAGAGATACCAGGAAATTCTTGTCAGAGAGGCTAAGAAATGTTATGAAAAGTGAAGCACATTTTGACATTCCTGAAAGGATTTGTGGGAACACAAGGTCATATATATTAGACTATAACAAAGACAGATTAAAGAAAGAAGAGAATACTACAGAGCATGAACTAGATGACAATTTATTGCTCCACAAGGAGTTGTCCCCTAGGAACCTTGTACGATCCTTGTCTGCTCCTGTATCACGAACATCATTTGAGAAGCTTCTTCTAGAGGATCGCCATATTTTAACAGGTGCCCTTATTCGGAGGAAGCTTGAAGCTGTTGATGAAACAATGCCTGTTGATAATAAAAAACAGAAGAAAGATAGATTTAATATTAAAGAAAAAGTTTCCAATTTTAAATATACTCTTGGTATGAGAGGAAAGTTGTTTGGCAAAAGGGTTCAGTCAATGGTAGAATCACATGGCAATGAATATGGTCCATTGGAAAACTCCACTGAGGTAGCTCCTAGTCCTGCATCTTTGTGCAGCTATGCTCCGGAAAAACTTGGGAGACAGACTGAATATTCAAGTCCAACATCAACTCCAGTCGTATCTTCAATAAACGATGTTGTTATGTGTAAGGATCTTGGAGATATTAGTTCTGGTTTTAATGATGGCCCTGAGGACTTCCCAATGAAGCAGGAGCCTCTTGAGTCTGAATTAGTTCAATTGGAGGATCCAGCAGAATCTTATGTAAGAGATCTGCTTGTTGCTTCTGGTCTGTACTTTGGTTCAAGTGATAAATCTTTGTCAAGAGGGGACACATTTGCAAAGACAATTGGCAACTCAGTTTTTGAAGAAGTGGAAGAATCTCATAAGATATTGCTCAAGGAGAATGAAAGATCTATAAAGGATCAGAATAAGTTAGAGCACAAGGTGTTACTTGATTTGTTAAATGAGGCACTTTACATTGTTCTTGGACCACCTTTGACATTGCCTAGATTCAGAAGGAAACTAAGCAGTTACTCCATGCAGCCACCACAATATGGAAAGGAACTACTCAAGATTGTTTGGGACATTATCCGTGTTTCTCTATATCCTTCATCAAACACATCTCATTCACTTGATAGTTTGGTGGCACAAGACCTGGGATCCATCTCCTGGTATGGACTAACAAATGATGAGATCAATATATTGGAAAGAGAGATAGCATGTCTAATCGCTGATGATTTGGTTGAAGAATTCATAAATAATATGCTTTTAGGTGTAGTGTGA 2505 0.388 MEGFLHTFEFNQGKMAKKVHAHKRQNGGLETYRDSMELQVETSRIHYPEGESPYSSQVEDGRSKNNSYSNVGSVRKQNDEELSKQSGPRNNAPSLVARLMGLDMMPLDTKSVILSDERSISENMERKFSKKGMNKRGSFGRGSSNFNNYNQTKFNSFYQDFDDEGRGQNFGEPRQREHPQEEELQEFKKEFEAYQAARLKECLKVVEIGNASRQMLAQENLDKEKVLHDASSQREASHSSETKLPNSDMMESISTKLKESYHSKSRTPCRDFEESLMMKSRSRLDICSSHTQIVTLKPGINRICNCNHEENWISSSDTLQGRNSIEDFLDEVRERLNCERQGKTVKKGFVGPGNGIDTTYHEKASGPKEIAHHVAKEVIRESVTIDAEENLHSSESTRSQKQQQKPFPIKWSRLPEFFSRDTRKFLSERLRNVMKSEAHFDIPERICGNTRSYILDYNKDRLKKEENTTEHELDDNLLLHKELSPRNLVRSLSAPVSRTSFEKLLLEDRHILTGALIRRKLEAVDETMPVDNKKQKKDRFNIKEKVSNFKYTLGMRGKLFGKRVQSMVESHGNEYGPLENSTEVAPSPASLCSYAPEKLGRQTEYSSPTSTPVVSSINDVVMCKDLGDISSGFNDGPEDFPMKQEPLESELVQLEDPAESYVRDLLVASGLYFGSSDKSLSRGDTFAKTIGNSVFEEVEESHKILLKENERSIKDQNKLEHKVLLDLLNEALYIVLGPPLTLPRFRRKLSSYSMQPPQYGKELLKIVWDIIRVSLYPSSNTSHSLDSLVAQDLGSISWYGLTNDEINILEREIACLIADDLVEEFINNMLLGVV* 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03168 834 MobiDBLite consensus disorder prediction 126 145 - -
Rops2g03168 834 MobiDBLite consensus disorder prediction 225 247 - -
Rops2g03168 834 MobiDBLite consensus disorder prediction 19 93 - -
Rops2g03168 834 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 830 - -
Rops2g03168 834 Pfam Domain of unknown function (DUF4378) 660 824 IPR025486 -
Rops2g03168 834 Pfam DUF761-associated sequence motif 89 106 IPR032795 -
Rops2g03168 834 MobiDBLite consensus disorder prediction 56 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03168 Rops-Chr2 57805816 57810268 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03168 74 829 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 35.012 1.06e-107 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03168 - - gmx:100810825 979.163