Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03165 ATGTCGTGTTCATCTTCATCTGGGTCTGAAGAAGATGAGGGGTTCGACTCCTACCGGAAAGGAGGGTACCACGCCGTCAGGGTCGGCGATCAGTTCGCCGGTGGTAGGTACATAGCTCAGAGGAAGCTTGGTTGGGGTCAGTTTTCAACCGTGTGGCTTGCTTATGATACTACCAACTCTGCTTTTGTTGCTCTCAAGATCCAGAAAAGTGCGGCGCAGTTTGTTCAGGCTGCCCTTCATGAGATTGATGTTCTTTTATCCATTGCTGATGGTGCTGATTCAAATTCAAAATGTATAGTCCAATTGATTGACCACTTTAAGCACACAGGCCCTAATGGCCAGCACCTTTGCATGGTCCTTGAGATTCTCGGAGATAGCTTGCTTCGTCTAATCAAATACAACCGTTACAAAGGCCTTCCATTGAATAAAGTTAGGGAGATTTGCAAATGCATGTTGATTGGTTTGGATTACTTGCATAGAGACCATGGTATTATCCACACTGACCTAAAACCAGAAAATGTTCTTCTAGTTTCTACCATTGATCCTACTAAAGACCCTGTGAGATCTGGACTCCCCCCAATTTTAGAGAGGCCTGAGGGAAACATAAATGGCGGAGTTCCAAGTCTTATTGAGAAAAAGTTGAAAAGGAGAGCAAGGAGGGCAGTTGCTAAAATATCTGGAAGAAGAGATTCAATGGGAGGAACAGCAGAAGCTCCAAAATCTGAGAGAAATATTGATGGGATTGATGTGAGATGCAAGGTGGTGGATTTTGGAAATGCATGTTGGGCTGATAAGCAGTTTGCAGAGGAAATTCAGACAAGACAGTACAGAGCTCCTGAAGTAATACTGCAGGCTGGTTATTCCTTCTCTGTTGACATGTGGTCTTTTGCTTGTATCGCTTTTGAGCTTGCCACTGGTGATATGCTGTTTACTCCCAAGGTTGGACAAGGTTTCAGTGAGGATGAGGATCACCTTGCCCTGATGATGGAACTCCTTGGAAAAATGCCGCGGAAGATTGCTACTACTGGAGTAAAATCCAAGGATTTCTTTGACAGACACGGGGACCTCAGAAGGATCCGAAGGCTAAAATTTTGGCCGCTTTACAATTTGTTGATTGATAGATATAAATTTTCAGAGACTGATGCTCATGAATTTTCAGAGTTTCTTACACCTCTTCTTGATTTTGCACCTGAGAAGCGGCCAACTGCACAGCAGTGCCTGCAACACCCATGGCTTGTGGGCAAGGAGTCTACTCCAAATGAAAAGAGAAATGAATCTAGTATGGAAAAGGTGGATGCTGGGATGAGTAACCTTAAGATCAAGGGGGGAAAATGA 1335 0.4427 MSCSSSSGSEEDEGFDSYRKGGYHAVRVGDQFAGGRYIAQRKLGWGQFSTVWLAYDTTNSAFVALKIQKSAAQFVQAALHEIDVLLSIADGADSNSKCIVQLIDHFKHTGPNGQHLCMVLEILGDSLLRLIKYNRYKGLPLNKVREICKCMLIGLDYLHRDHGIIHTDLKPENVLLVSTIDPTKDPVRSGLPPILERPEGNINGGVPSLIEKKLKRRARRAVAKISGRRDSMGGTAEAPKSERNIDGIDVRCKVVDFGNACWADKQFAEEIQTRQYRAPEVILQAGYSFSVDMWSFACIAFELATGDMLFTPKVGQGFSEDEDHLALMMELLGKMPRKIATTGVKSKDFFDRHGDLRRIRRLKFWPLYNLLIDRYKFSETDAHEFSEFLTPLLDFAPEKRPTAQQCLQHPWLVGKESTPNEKRNESSMEKVDAGMSNLKIKGGK* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03165 444 Gene3D Transferase(Phosphotransferase) domain 1 91 412 - -
Rops2g03165 444 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 234 425 - -
Rops2g03165 444 FunFam Serine/threonine-protein kinase SRPK 116 412 - -
Rops2g03165 444 ProSitePatterns Protein kinases ATP-binding region signature. 43 66 IPR017441 GO:0005524
Rops2g03165 444 ProSiteProfiles Protein kinase domain profile. 37 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03165 444 Gene3D Phosphorylase Kinase; domain 1 23 122 - -
Rops2g03165 444 FunFam Protein kinase superfamily protein 23 122 - -
Rops2g03165 444 Pfam Protein kinase domain 251 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03165 444 Pfam Protein kinase domain 38 178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03165 444 MobiDBLite consensus disorder prediction 413 444 - -
Rops2g03165 444 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Rops2g03165 444 SUPERFAMILY Protein kinase-like (PK-like) 31 417 IPR011009 -
Rops2g03165 444 CDD STKc_SRPK 26 412 - -
Rops2g03165 444 SMART serkin_6 37 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03165 Rops-Chr2 57742785 57747740 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03165 5 444 EF-hand Containing Proteins AT5G22840 49.222 1.95e-170 488
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Rops2g03165 Pkinase 1.9e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03165 K08832 - gmx:100814976 786.178