Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03158 ATGAATCCATCTTCATCGAGTAAACGTCCTCGAAGGTTCCCTATAGAGGTTGTAGTGGAAAATGATCTTCATCAGGGATATGGTATGTTGCCAGAAGCCTTTTGTTTTGAATTTGCTTTGATAATAGGTTCATCGACGAAAATTATTACATCTTCAGGAGATTTATTTGATGTTCGTTTTATGGAAACATTATTTGGAGACTCATTTACAAAGGGTTGGATGGATTTTCTTAATCAATGCAAGATGTCCAATAACCCTCGTGTTATTTTGAAATACCATGGTGAATCATGGTTCAGAATGCACAAGGATGACCAGGAAAATATTCCCAATCTAATTCAACACCCATCCATGTATGAAATTAATCTCATTGATTACTCTATTTCTTCTCAGCAGTCTCTTCCTTCTCAGTTTGTCCGTGAAGGTCTTAATCTGAGGCGCAAAACCATTACTATCAACCTGCAAGATGGGAGGTCCTGGATTTGTGGATTGTACCATCCAGACAGAAATGACAACGAAGCTAGGATCAATAAGGGCTGGAAAAAGTTTACAACAGATTTGAATCTCAAGCCTTCCAACACCCTATACTTTGAAGTGATCGACCGAAAGAAAAACTTCCTTCAAGCTCATATATCATGA 636 0.3789 MNPSSSSKRPRRFPIEVVVENDLHQGYGMLPEAFCFEFALIIGSSTKIITSSGDLFDVRFMETLFGDSFTKGWMDFLNQCKMSNNPRVILKYHGESWFRMHKDDQENIPNLIQHPSMYEINLIDYSISSQQSLPSQFVREGLNLRRKTITINLQDGRSWICGLYHPDRNDNEARINKGWKKFTTDLNLKPSNTLYFEVIDRKKNFLQAHIS* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03158 211 Gene3D - 102 211 IPR015300 -
Rops2g03158 211 Pfam B3 DNA binding domain 127 205 IPR003340 GO:0003677
Rops2g03158 211 ProSiteProfiles B3 DNA-binding domain profile. 116 211 IPR003340 GO:0003677
Rops2g03158 211 SUPERFAMILY DNA-binding pseudobarrel domain 118 202 IPR015300 -
Rops2g03158 211 SUPERFAMILY DNA-binding pseudobarrel domain 11 103 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03158 Rops-Chr2 57578708 57579630 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Rops2g03158 B3 6.8e-10 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03158 - K10534 psom:113324113 56.9954