Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03157 ATGAGCAAAGCTTGGATTCTTGTCCTTGTGATCTTCTACAGTGGCTTTCCATCAAATGGAATCAGCAATGTTTCTATAAGACCAAGTGTTGTTAATATTGGGGCAATTTTATCTTTCAACTCAACAATTGGCAGAGTGGCTAAAGTTGCCATAGAAGCAGCAGTGGAAGATATAAATTCCAATGCAACGATTCTCAATGGAACTAAGCTTAACCTTTCAATGCAGGATACAAAATTCTCCAGTGGATTTCTAGGGATTATTGACTCATTTATGTTGATGGAGCACAACACCGTGGCCATTATTGGTCCCCAGTACTCAGTCATGGCTCATGTGATTTCACATATTGCAAATGAGATGCAAGTACCTCTACTATCATTTGCAGCAGCAGACCCTACACTCACTTCACTTCAGTTCCCATATTTTGTTAGGACAACACAGAGTGACCTGTATCAGATGTCTGCTGTGGCAGAAATTGTTGACCACTTTCAATGGAGAGATGTAATAGCAATTTTTGTTGATGATGATCATGGAAGAAATGGGGTAGCTGCATTAGGGGATAAGCTAGCAGAGAAACGTTGTAAAATATCATATAAAGCACACTTTAGGCCAGATAATAATATTAGCCTTGAAGAAATAAATAATGCATTAGTTAAGATAGCTTTAATGGAGTCTAGAGTAATAGTCCTTCACTTATTCCCTGCTTTTGGTCTAAAAGTACTTCATGCGGCTCAGTCACTAGGCATGATGGGAAGTGGTTATGTATGGATAGCCACTGATTGGCTTTCTACAGTGCTAGATTCAGACACTTCCTTGTTCACATCATCAGCCATGAATGACATCCAAGGTGTTATCACCTTGCGCATGTATACACCAGATTCTAAAATCAAAAGAAATTTTGTTTCCAGGTGGAACAAACTTAGCCATAAAAATGATCCTGATCAGGGCCCTTTTGGCTTAAACATCTTTGGTCTATATGCCTATGACACTGTTTGGATTCTTGCTTATGCACTTGATGCATTATTAAGCAATGGGGGGAATTTGTCTTTTTCAAATGATTCTAGTCTAAACATGTTAAGGGGGGATATCCTTCATTTGGATACTATGGGGGTCTTTCTTAATGGTAGCATGTTGCTTCAAAATATTTTAGAGGTCAATAGAACTGGTTTAACAGGCCAAATGATGTTTGATTCAGATGGAAATTTAATGCATCCATCATATGAAATCATTAATGTGATAGGTACTGGAATTAGAAGGATTGGTTATTGGTCAGATTCCAAAGGCCTGCACACTGAGGAAGCTCCTCCTAATCATTCCAATTCTAGTGAAGGACTATATGGTGTGATCTGGCCTGGTCAAACAACTCACACACCTCGTGGTTGGGTTTTTGCTAGCAATGGAAGACACTTGAGAATTGGGGTGCCACTTAGAATTAGTTACCGTGAATTTGTGTCAAGAATTGAAGGCACTGACATGTTTAGTGGCTATTGTATAGATGTGTTTACTGCTGCACTGAACTTGTTGCCTTATCCAGTTCCATACAAGTTTATTCCATTTGGTGATGGTAAAACTAACCCTTTAAATTCAGACCTTCTCCACATGATCACAACTGGTGCCTTTGATGCAGTAGTGGGGGACATTACTATTACCACAAACCGGACTAAGATAGTGGATTTTACACAACCATATATTGAGTCTGGGCTAGTTGTTGTGGCACCTATCAAGAAGTTGAAATCCAGTGCTTGGGCTTTCCTAACACCATTCACTCCAATGATGTGGTTTGTGACTGGGATGTTTTTCTTAGTGGTGGGAGTTGTTGTGTGGATTTTAGAGCGTCGTGTAAATGATGACTTTAGAGGCCCTGCTAGAAGACAATTTGTCACCATTATCTGGTTTAGCTTTTCAACTCTATTTTTTGCACATAGAGAGAAAACTGTCAGCACCCTTGGTCGTTTAGTGCTAATCATATGGTTGTTTGTGGTTCTTATACTCAACTCAAGCTATATTGCAAGCCTTACCTCTATCCTTACAGTGGAACAACTCTCTTCCCCAGTTAAGGGAATCGAAAGCTTAGTAATAAGCAATGACCGAATTGGTTATCTGAGGGGTTCATTTGCTGAAAATTATCTAACTGAAGAGCTCAATATACACAGATCAAGGTTGGTTCCTCTCAACTCTCCATCAGAATATGAGAAAGCCTTGAAGGATGGACTAGCTAGTGGTGGTGTTACTGCAATAATAGATGAACGTGCATACATGGAGCTTTTTCTAGCAACCAGATGTGACTTTGGTATTGTTGGTCAAGAGTTCACCAAGATGGGATGGGGCTTTGGCTTCCCAAGAGAATCTCCCCTAGCAATTGACATGTCAACTGCCATCCTAAAACTATCAGAGAATGGTGACCTTCAGAGAATTCATGACAAATGGCTAACAAGAAGTGCTTGCAGCTCAGAAGGTGCAAAACAAGGCATAGACCGACTTGAGCTAAAAAGCTTTTGGGGTCTCTTCCTTCTAATTGGCATAACATTGTTCATTGCTCTCCTTTGCTATGTTATTCGAATGGTCTATTGCTTTAGCAGGCACTCCAATAATAACCCTGAAAGGTCATCAAGCTCTACTTGTCTTCGATCATTCCTTTCCTTTGTGAATGAGAAAGAAGAGGAAGACAAATACAAGCTAAAGAGAAGTCGAAAAGAAAAGTGCTCTTGTAACAAGGTAGTGCATGAAGATGGATCTTTAGATGGCTTAAGTGATAGTGTCCATATTGACAATGACGCCATTGCCTAA 2784 0.3987 MSKAWILVLVIFYSGFPSNGISNVSIRPSVVNIGAILSFNSTIGRVAKVAIEAAVEDINSNATILNGTKLNLSMQDTKFSSGFLGIIDSFMLMEHNTVAIIGPQYSVMAHVISHIANEMQVPLLSFAAADPTLTSLQFPYFVRTTQSDLYQMSAVAEIVDHFQWRDVIAIFVDDDHGRNGVAALGDKLAEKRCKISYKAHFRPDNNISLEEINNALVKIALMESRVIVLHLFPAFGLKVLHAAQSLGMMGSGYVWIATDWLSTVLDSDTSLFTSSAMNDIQGVITLRMYTPDSKIKRNFVSRWNKLSHKNDPDQGPFGLNIFGLYAYDTVWILAYALDALLSNGGNLSFSNDSSLNMLRGDILHLDTMGVFLNGSMLLQNILEVNRTGLTGQMMFDSDGNLMHPSYEIINVIGTGIRRIGYWSDSKGLHTEEAPPNHSNSSEGLYGVIWPGQTTHTPRGWVFASNGRHLRIGVPLRISYREFVSRIEGTDMFSGYCIDVFTAALNLLPYPVPYKFIPFGDGKTNPLNSDLLHMITTGAFDAVVGDITITTNRTKIVDFTQPYIESGLVVVAPIKKLKSSAWAFLTPFTPMMWFVTGMFFLVVGVVVWILERRVNDDFRGPARRQFVTIIWFSFSTLFFAHREKTVSTLGRLVLIIWLFVVLILNSSYIASLTSILTVEQLSSPVKGIESLVISNDRIGYLRGSFAENYLTEELNIHRSRLVPLNSPSEYEKALKDGLASGGVTAIIDERAYMELFLATRCDFGIVGQEFTKMGWGFGFPRESPLAIDMSTAILKLSENGDLQRIHDKWLTRSACSSEGAKQGIDRLELKSFWGLFLLIGITLFIALLCYVIRMVYCFSRHSNNNPERSSSSTCLRSFLSFVNEKEEEDKYKLKRSRKEKCSCNKVVHEDGSLDGLSDSVHIDNDAIA* 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03157 927 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 44 60 - -
Rops2g03157 927 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 105 133 - -
Rops2g03157 927 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 326 338 - -
Rops2g03157 927 Gene3D - 49 403 - -
Rops2g03157 927 Gene3D - 740 816 - -
Rops2g03157 927 SUPERFAMILY Periplasmic binding protein-like II 445 811 - -
Rops2g03157 927 Pfam Ligand-gated ion channel 811 841 IPR001320 GO:0015276|GO:0016020
Rops2g03157 927 Pfam Receptor family ligand binding region 49 413 IPR001828 -
Rops2g03157 927 FunFam Glutamate receptor 464 580 - -
Rops2g03157 927 CDD PBP1_GABAb_receptor_plant 32 428 IPR044440 -
Rops2g03157 927 Gene3D - 460 579 - -
Rops2g03157 927 FunFam Glutamate receptor 580 710 - -
Rops2g03157 927 FunFam Glutamate receptor 706 813 - -
Rops2g03157 927 FunFam Glutamate receptor 147 307 - -
Rops2g03157 927 Gene3D - 147 428 - -
Rops2g03157 927 SUPERFAMILY Periplasmic binding protein-like I 27 460 IPR028082 -
Rops2g03157 927 CDD GluR_Plant 469 809 - -
Rops2g03157 927 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 31 867 IPR015683 -
Rops2g03157 927 PIRSF IGluLR_plant 1 920 IPR017103 -
Rops2g03157 927 SMART GluR_14 470 811 IPR001320 GO:0015276|GO:0016020
Rops2g03157 927 Pfam Bacterial extracellular solute-binding proteins, family 3 492 810 IPR001638 -
Rops2g03157 927 Gene3D - 580 717 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03157 Rops-Chr2 57543973 57548837 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03157 5 903 Ion Channels AT3G51480 56.608 0.0 1065
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03157 K05387 - gmx:100789442 1560.43