Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03154 ATGATGGAAAATGGATATGTCTGGATCTCCACTAATTTTATGTCTACTTGGCTGGACATAGATAGTCCCCTCTCTTCAGATGTAACGGATGACATTCAAGGAGTTATTACACTACGTATGTACATACCTGATTCAAAGCTCAAAAGATGGTTCGTTTCTAAGTGGACAAACTTGACTAGCAGAAAGACTGCTAATGGTGCCCTTGGTTTGAGTACTTATGGAATCTTTGCATATGATACTGTTTATGTGCTTGCTCATGCACTTGATACATTTTTCAAACAAGGGAACCAAATTACATTTTCACATGATCCAAAGTTATCTCAACTACATGGAGACAACATGCATCTTGATGCTGTGAAAATCTTCAATGAAGGAAAACTGTTGCGTAAAAGTATTTATGAGGTTAACATGACAGGTGTAACAGGTCCATTCAGGTATACATCTGATGGAAACCTTGCTAATCCAGCATATGAAATCATCAATGTGATTGGAACAGGGACTCGGAGGATTGGTTATTGGTCTAATTACTCTGGATTATCAGTTGTTCCTCCAGAAGCACTTTATTCAAAACCACCTAATCGTTCCAGTGCAAACCAAAAGCTACTCCCTGTGTTTTGGCCAGGACAAACAACCCAGAAGCCTCGTGGATGGGTTTTTCCAAACAATGGAAGGATGTTAAAAATTGGAGTACCAAAAAGGGTTAGTTATCGTGAATTTGTCTCTCAAGTACAAGCCACTGACACGTTCAAGGGATTCTGTTTCTTTCTGCAGTAA 774 0.3915 MMENGYVWISTNFMSTWLDIDSPLSSDVTDDIQGVITLRMYIPDSKLKRWFVSKWTNLTSRKTANGALGLSTYGIFAYDTVYVLAHALDTFFKQGNQITFSHDPKLSQLHGDNMHLDAVKIFNEGKLLRKSIYEVNMTGVTGPFRYTSDGNLANPAYEIINVIGTGTRRIGYWSNYSGLSVVPPEALYSKPPNRSSANQKLLPVFWPGQTTQKPRGWVFPNNGRMLKIGVPKRVSYREFVSQVQATDTFKGFCFFLQ* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03154 257 Gene3D - 1 179 - -
Rops2g03154 257 SUPERFAMILY Periplasmic binding protein-like I 1 218 IPR028082 -
Rops2g03154 257 Pfam Receptor family ligand binding region 1 164 IPR001828 -
Rops2g03154 257 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 1 253 IPR015683 -
Rops2g03154 257 Gene3D - 40 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03154 Rops-Chr2 57521908 57530018 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03154 1 253 Ion Channels AT3G51480 51.383 2.10e-84 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03154 K05387 - gmx:100788917 464.922