Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03153 ATGGATAATTCCACAATACCTGCTTCTGTAAATATTGGGGTTCTCTACTCTTTCAATACTAGTGTCGGTAGAATTGTGAAAATTGCTGTACAAGCTGCGGTTGAAGATATAAATGCTGATCCATCTATTCTTGGTAAAACTAAGTTGAATATCTCACTGCAAGAAGATTCCAAATATAGAGGTTTTTTGAGCATTGCTGAGGCCTTGCAGCTCATGGCAACACAAACTGTGGCCATAATTGGCCCCCAGACCTCTACAACGGCTCATGTCATATCTCATATAGCAAACGAGCTCCAAGTTCCTCTGCTATCATTTTCAGCCACTGACCCTACCCTTTCTTCACTTCAATTCCCATTCTTTGTGAGAACTGCTTTTAGTGACATGTTTCAAATGACTGCAATAGCAGACCTTGTTAACTACTATGGATGGAGAGAGGTTAATGCAGTTTATGGTGATGATGACTATGGGAGGAATGGAATTGGTGCCTTAGGAGATAAGCTTGCTGAGAGACGATGCAAGATCTCATTTAAAGCTCCAATGACTCCTGAGGCAACTAGGGAGGAGATTACAGATGTGCTTGTTCAAGTAGCCCTGGCAGAATCCCGGGTTATAGTTCTTCACACAAGTACTGCTTGGGGTCCAAAAGTGTTGAGTGTGGCAAAATCTCTTGGGATGATGGAAAATGGATATGTCTGGATCTCCACTAATTTTATGTCTACTTGGCTGGACATAGATAGTCCCCTCTCTTCAGATGTAACGGATGACATTCAAGGAGTTATTACACTACGTATGTACATACCTGATTCAAAGCTCAAAAGATGGTTCGTTTCTAAGTGGACAAACTTGACTAGCGGAAAGACTGCTAATGGTCCCCTTGGTTTGAGTACTTATGGAATCTTTGCATATGATACTGTTTATGTGCTTGCTCATGCACTTGATACATTTTTCAAACAAGGGAACCAAATTACATTTTCACATGATCCAAAGTTATCTCAACTGCATGGAGACAACATGCATCTTGATGCTGTGAAAATCTTCAATGAAGGAAAACTGTTGCGTAAAAGTATTTATGAGGTTAACATGACAGGTGTAACAGGTCCATTCAGGTATACATCTGATGGAAACCTTGCTAATCCAGCATATGAAATCATCAATGTGATTGGAACAGGGACTCGGAGGATTGGTTATTGGTCTAATTACTCTGGATTATCAGTTGTTCCTCCAGAAGCACTTTATTCAAAACCACCTAATCGTTCCAGTGCAAACCAAAAGCTACTCCCTGTGTTTTGGCCAGGACAAACAACCCAGAAGCCTCGTGGATGGGTTTTTCCAAACAATGGAAGGATGTTAAAAATTGGAGTACCAAAAAGGGTTAGTTATCGTGAATTTGTCTCTCAAGTACAAGCCACTGACACGTTCAAGGGATTCTGCATTGATGTATTTCTTTCTGCAGTAAACTTGTTGCCCTATGCTGTCCCCTATAAATTTATTTCATACGGGGATGGTATCAGCAATCCTAGCAACACTGAGCTTGTGCGTCTAATCACAGCTGGTGTCTTTGATGCTGCAGTAGGTGACATTACAATTACTACAGAAAGAACAAAGATGGTGGATTTTACTCAGCCATATATTGAGTCTGGTCTAGTGGTGGTAGCATCAGTTAAGAAGGTGGAATCCAATGCTTGGGCATTTTTGACACCATTTACACCAATGATGTGGACCGTCACAGCTATCTTTTTCCTAGTAGTGGGAGCCGTTGTTTGGATTTTAGAGCATAGACTGAATGATGATTTTAGGGGACCTCCCAAAAAACAATTAATCACAATTTTGTGGTTTAGTTTTTCAACTATGTTCTTTGCTCACAGGGAAAATACAGTGAGCACTCTTGGTCGCTTTGTGCTGCTTATATGGTTATTTGTAGTTCTAATAATTAACTCAAGTTACACGGCAAGCCTTACTTCAATCCTCACAGTGCAACAACTTTCTTCACCTGTTAAAGGCATTGAAAGTTTAGTAAATAGCAAAGAGCCTATTGGCTACTTGCAAGGTTCTTTTACTCGGTCTTATTTAATTGAGGAAATTGGTATTGATGAATCCAGACTAGTTCCTCTAAAAACACCAGAAGAAACCATGAAAGCACTGGAAAAGGGTCCTCAAAAGGGTGGTGTTGCTGCATATGTTGATGAGCGTGCTTACATAGAGCTCTTCCTTTCAAGCCGGTGTGATTTTACTGTTGTAGGTCAAGAGTTCACCAGAAATGGTTGGGGATTTGCCTTTCCACGAGACTCGCCATTAGCAGTTGACCTTTCAACTGCCATTTTGGAGTTGGCAGAGAATGGAGATTTACAAAGGATCCATGACAAATGGCTTTTGAGCAAAGCATGCCTCTTACAAGGTGCAAAGCTTGAAGTGGACAGACTCAATCTCAAAAGCTTTTGGGGCCTCTATCTAGTATGTGGGTTGGCATGTTTGCTTGCTCTCTTGATATATCTTTTTCAGACACTAAGGCAGTACAACAAGCACCACCAACCTGAGGAACTCGAGTCTCCTGGCCAAGGCTCAGGATCTTCACGTCTCAAGACTTTTCTTTCATTTGTAGATGAAAAAGAAGAGATAGTTAAAAGCCGCTCCAAAAGAAAGCAAATGGAAAGGATATACAGAAGCAAAAGTGAAGTTGGATCATCCATCATCATTAATAAAGAATATTCTGAGTCATCATTAAACAGAATTGATTCACCTAATGAAGCCTGA 2751 0.4068 MDNSTIPASVNIGVLYSFNTSVGRIVKIAVQAAVEDINADPSILGKTKLNISLQEDSKYRGFLSIAEALQLMATQTVAIIGPQTSTTAHVISHIANELQVPLLSFSATDPTLSSLQFPFFVRTAFSDMFQMTAIADLVNYYGWREVNAVYGDDDYGRNGIGALGDKLAERRCKISFKAPMTPEATREEITDVLVQVALAESRVIVLHTSTAWGPKVLSVAKSLGMMENGYVWISTNFMSTWLDIDSPLSSDVTDDIQGVITLRMYIPDSKLKRWFVSKWTNLTSGKTANGPLGLSTYGIFAYDTVYVLAHALDTFFKQGNQITFSHDPKLSQLHGDNMHLDAVKIFNEGKLLRKSIYEVNMTGVTGPFRYTSDGNLANPAYEIINVIGTGTRRIGYWSNYSGLSVVPPEALYSKPPNRSSANQKLLPVFWPGQTTQKPRGWVFPNNGRMLKIGVPKRVSYREFVSQVQATDTFKGFCIDVFLSAVNLLPYAVPYKFISYGDGISNPSNTELVRLITAGVFDAAVGDITITTERTKMVDFTQPYIESGLVVVASVKKVESNAWAFLTPFTPMMWTVTAIFFLVVGAVVWILEHRLNDDFRGPPKKQLITILWFSFSTMFFAHRENTVSTLGRFVLLIWLFVVLIINSSYTASLTSILTVQQLSSPVKGIESLVNSKEPIGYLQGSFTRSYLIEEIGIDESRLVPLKTPEETMKALEKGPQKGGVAAYVDERAYIELFLSSRCDFTVVGQEFTRNGWGFAFPRDSPLAVDLSTAILELAENGDLQRIHDKWLLSKACLLQGAKLEVDRLNLKSFWGLYLVCGLACLLALLIYLFQTLRQYNKHHQPEELESPGQGSGSSRLKTFLSFVDEKEEIVKSRSKRKQMERIYRSKSEVGSSIIINKEYSESSLNRIDSPNEA* 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03153 916 Gene3D - 731 796 - -
Rops2g03153 916 SUPERFAMILY Periplasmic binding protein-like I 6 442 IPR028082 -
Rops2g03153 916 SMART GluR_14 451 792 IPR001320 GO:0015276|GO:0016020
Rops2g03153 916 Gene3D - 126 403 - -
Rops2g03153 916 FunFam Glutamate receptor 561 691 - -
Rops2g03153 916 Pfam Receptor family ligand binding region 27 388 IPR001828 -
Rops2g03153 916 Gene3D - 449 560 - -
Rops2g03153 916 Gene3D - 561 689 - -
Rops2g03153 916 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 10 862 IPR015683 -
Rops2g03153 916 PIRSF IGluLR_plant 1 913 IPR017103 -
Rops2g03153 916 SUPERFAMILY Periplasmic binding protein-like II 425 792 - -
Rops2g03153 916 CDD GluR_Plant 448 790 - -
Rops2g03153 916 FunFam Glutamate receptor 126 277 - -
Rops2g03153 916 Pfam Bacterial extracellular solute-binding proteins, family 3 505 790 IPR001638 -
Rops2g03153 916 Gene3D - 28 378 - -
Rops2g03153 916 FunFam Glutamate receptor 687 794 - -
Rops2g03153 916 CDD PBP1_GABAb_receptor_plant 11 407 IPR044440 -
Rops2g03153 916 FunFam Glutamate receptor 445 561 - -
Rops2g03153 916 Pfam Ligand-gated ion channel 791 823 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03153 Rops-Chr2 57516634 57521343 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03153 4 885 Ion Channels AT3G51480 61.469 0.0 1152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03153 K05387 - gmx:100788917 1612.05