Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03151 ATGAGATTCCTTCTCTTTCTCATTTCCTTGTTCCTGTTCTGCTCTTGCTTCAGCTTCACCCTCCATGCTGACGCACCCACCTCAGCAACCTGCCACCATGATCAACAAGGACTTTCTCGACCCTCTGCTCGATCCCTTCTCTCTCTTCCTCCTAAGCCAGCAACTACTGCTCTGGTTGCCACACTAGATGGGACTATGTATTTGGTGGAGAGGCATGAGAATGATTCCATGAGGGTGATATGGTCATTCTCAACAGGATCACCAATATACACTTCATATCAAGCTCCTAACAGTGGTAAAGAAAATGCATCTGCAGCACTAATTAGCGGGTTCGTGGAATGTGGGGAAGATTGGTCATTGTACATGCATGACAAACACTTTGGTAAAATGAAAATCTCAGAATCTATTGCAGAATTTGTAGCTCGGACACCTACCTTTTCAGATGATGGAGCAGTTACACTTGGATCCAAAAGAAGCACTTTATTTGAAGTTGATGCTAAAACTGGATCAATCATTCAAATCCATGCTATGTCTGATTTGGACAATGCTTCTGCACCTTGGAGTAACGACAGGCAGAGTGATACTAATATCCTCAGTGCAAAGAATAAGGATCTTTCTGATCCTGTGAAGATAAATTCACCACAGCTGCTGCTCAAGATTTTTAGGACAGATTATTCTCTACAATCTGTTGGTCCCACCTCAGGAATAGTTTTGTGGACTATGAAAGTTGCTGAATTTGAGGCTGTATTATTATGCCAACATACTTCATTTGATGTAGAGGATGAGTATGCTTCTGACAGGGGGCTCAATTTTGCAATGCCATACCCTTGTCAAGAGATACAACAAGTCTTCCGCCTGAAAAAGAATTTTTTGTTAGAACCTTCAATCACTGAAAGATTACCTGGTGCTTATCATGAAATTGATATGCCCTCAAAACCTACCTCAGATCTGTTGCATCTGTTACTGCCTAATGTTGAGAGATTTTTCAATGTTTATCATGTGATTAAGAATCAAGTTATACTGAAGGACCAAAACAGCGAGTCTGAATTAGAAAGTTCACATGCTAAGAAAAAGAAAACACATGAGTATGGAAAGAACAATGGCACTGTTGATAAAAAGGAAAAGCATCTATCTTCAGAAGATGAGAATCTACCGACACAAAAGGATACTAACAGAGATGTATGGCGGAACTTTAACCAAGTTGATGAAGGTGTTGATGGACGAAGGATTGGTAAATTATTTGTTTTGAATAAAGAGATTGCCAAGGGAAGCAATGGTACCATTGTCCTTGAGGGGATATATGAAGGCCGGGCTGTTGCTGTCAAACGTCTTGTCAAGGCTCATCACAATGTAGCCTATAAAGAAATCCAAAACCTCATTGTGTCTGACCGCCATCCAAACATTGTCCGATGGCATGGGGTGGAGTATGATCAAGATTTTGTCTACCTTGCTCTTGAACGTTGTACATGCAACTTAAATGACTTGATTCAAATTTATTCAGATAGATTAGAAAACACCATGTTTAGCAAGGACCAAGCTTTCAAATGTTTGATGAAGGCCCAAATGGAGATAGGGAAGGATAATACACAATATCTTTGGAAATCAAACGGCTATCCATCACCTCTGTTACTAAAACTGATGAGGGATGTTGTTTCCGGGGTTGTTCATTTGCATGAACTAGGAATAATACATCGAGATTTGAAACCCCAAAATGTTCTAATAATCAAGGAAAGATCCTTATGTGCAAAGCTTTCGGATATGGGCATTAGCAAACGTCTTCTTGAAGATATGTCTTCTTTGGGTCAGAATGCTACTGGTGGTGGCAGTTCTGGTTGGCAAGCACCAGAGCAGCTTATTCAAGGACGTCAAACACGGGCTGTAGATATATTTAGTTTAGGTTGTGTCCTCTTTTTCTGCATGACTGGGGGGAAGCATCCATTTGGAGAGCATTTAGAACGTGATGTCAATATTGTGAAAAATCAAAAGGATCTTTTCTTAGTGGAATTCATTCCTGAAGCTGAGGATCTAATTAGCCGTTTATTAAATCCTGACCCTGATCTAAGGCCAAAGGCGATTGAAGTATTGCACCATCCTTTTTTCTGGAGTTCCGAGATGAGACTTTCTTTTTTACGTGACACCAGTGACAGGGTGGAACTGGAAGATAGAGAAGCTGATCCTGATCTTTTGAGGGGGTTAGAAAGCATTGCCTCAGTGGCCTTAGGTGGAAAATGGGATGAAAGGATGGAACCAGCTTTCATTGCTAACATTGGTTATTACCGGCGATATAAGTATAACAGTGTTCGAGACTTGTTGCGGGTTATGAGAAACAAGCTAAATCATTATAGAGAATTGCCTAAAAAAATTCAGGTACTTGTAGGACCTGTTCCTGAAGGATTCAATGACTACTTTGCAAGTCGATTTCCAAGACTCTTGATTGAAGTGTACAGAGTTATATACAACTATTGCAAGGAGGAAGAATGTTTCCAAAGCAGGAACCCTGGAGTTGCAACAGGGAATGAAGATTGA 2526 0.4058 MRFLLFLISLFLFCSCFSFTLHADAPTSATCHHDQQGLSRPSARSLLSLPPKPATTALVATLDGTMYLVERHENDSMRVIWSFSTGSPIYTSYQAPNSGKENASAALISGFVECGEDWSLYMHDKHFGKMKISESIAEFVARTPTFSDDGAVTLGSKRSTLFEVDAKTGSIIQIHAMSDLDNASAPWSNDRQSDTNILSAKNKDLSDPVKINSPQLLLKIFRTDYSLQSVGPTSGIVLWTMKVAEFEAVLLCQHTSFDVEDEYASDRGLNFAMPYPCQEIQQVFRLKKNFLLEPSITERLPGAYHEIDMPSKPTSDLLHLLLPNVERFFNVYHVIKNQVILKDQNSESELESSHAKKKKTHEYGKNNGTVDKKEKHLSSEDENLPTQKDTNRDVWRNFNQVDEGVDGRRIGKLFVLNKEIAKGSNGTIVLEGIYEGRAVAVKRLVKAHHNVAYKEIQNLIVSDRHPNIVRWHGVEYDQDFVYLALERCTCNLNDLIQIYSDRLENTMFSKDQAFKCLMKAQMEIGKDNTQYLWKSNGYPSPLLLKLMRDVVSGVVHLHELGIIHRDLKPQNVLIIKERSLCAKLSDMGISKRLLEDMSSLGQNATGGGSSGWQAPEQLIQGRQTRAVDIFSLGCVLFFCMTGGKHPFGEHLERDVNIVKNQKDLFLVEFIPEAEDLISRLLNPDPDLRPKAIEVLHHPFFWSSEMRLSFLRDTSDRVELEDREADPDLLRGLESIASVALGGKWDERMEPAFIANIGYYRRYKYNSVRDLLRVMRNKLNHYRELPKKIQVLVGPVPEGFNDYFASRFPRLLIEVYRVIYNYCKEEECFQSRNPGVATGNED* 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03151 841 SUPERFAMILY Protein kinase-like (PK-like) 407 710 IPR011009 -
Rops2g03151 841 ProSitePatterns Serine/Threonine protein kinases active-site signature. 562 574 IPR008271 GO:0004672|GO:0006468
Rops2g03151 841 FunFam Putative Serine/threonine-protein kinase/endoribonuclease IRE1 406 486 - -
Rops2g03151 841 Gene3D Transferase(Phosphotransferase) domain 1 523 702 - -
Rops2g03151 841 PANTHER IRE1-RELATED 130 830 IPR045133 GO:0004521|GO:0004674|GO:0030968
Rops2g03151 841 SMART PGNneu 765 819 - -
Rops2g03151 841 SMART serkin_6 414 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03151 841 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Rops2g03151 841 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 55 204 IPR011047 -
Rops2g03151 841 Pfam Ribonuclease 2-5A 706 830 IPR010513 GO:0004540|GO:0006397
Rops2g03151 841 MobiDBLite consensus disorder prediction 347 389 - -
Rops2g03151 841 Gene3D - 43 255 IPR015943 GO:0005515
Rops2g03151 841 Pfam Protein kinase domain 416 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03151 841 ProSiteProfiles KEN domain profile. 703 834 IPR010513 GO:0004540|GO:0006397
Rops2g03151 841 FunFam Serine/threonine-protein kinase/endoribonuclease IRE1a 525 702 - -
Rops2g03151 841 CDD RNase_Ire1 704 830 - -
Rops2g03151 841 Gene3D KEN domain 703 836 IPR038357 -
Rops2g03151 841 ProSiteProfiles Protein kinase domain profile. 414 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03151 841 FunFam Serine/threonine-protein kinase/endoribonuclease IRE1 704 832 - -
Rops2g03151 841 MobiDBLite consensus disorder prediction 346 390 - -
Rops2g03151 841 Gene3D Phosphorylase Kinase; domain 1 401 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03151 Rops-Chr2 57507688 57516808 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03151 385 699 MAP Kinase Kinase Kinase AT3G06030 24.765 1.32e-21 98.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Rops2g03151 Pkinase 2.4e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03151 K08852 - gmx:100785904 1259.2