Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03116 ATGTCACAAAACTGCATAGCACCTAAACCAGAACACTTCAACAGTCACCCTTTGGAAGGGCCACCACCAGAGATGACTGAGCCTCATAACTCAACTGTTCATTCCTACCCCATACAAACTAATGAGCAAGCTTTAGCAAAACTCACTATGTACCCAATAACTTTGAAGTTTGAGGACTTGGTGTACAAAGTTAAATTAGAGCAGAAAAGTCTGTGTTGGGGCAGCACATGGACTTCAAAAGAGAAAACCATATTGAATGGTGTTACAGGTATGGTTTGCCCTGGTGAAATATTGGCTATGTTGGGGCCATCTGGCAGTGGCAAAACCACACTTCTTACAGCACTTGGAGGACGTCTCAGTGGAAAATTATCTGGAAAGATCACATACAACAATCAGCCTTTTTCAGGTGCCATGAAAAGAAACACAGGTTTTGTGGCCCAGGATGATGTGCTATACCCTCATCTCACTGTGATTGAAACTCTAGTCTTCACTGCACTTCTAAGGCTTCCCAACAGCTTGACCAGGTATGAGAAAGTTCAGCATGTAGAGAGTGTCATCAATGAGCTAGGACTGAATAGGTGCAGGAACAGCATGATTGGAGGCCCACTTTTCAGAGGAATATCAGGTGGGGAAAAAAAGAGGGTGAGTATAGGCCAGGAAATGCTCATCAATCCAAGCCTTCTGCTTCTAGATGAGCCCACTTCAGGTTTGGACTCTACAACAGCACAAAGGATATTAAACACAATAAAATGCCTTGCTAGTGGGGGTAGAACTGTTGTCACCACCATTCATCAACCCTCTAGTCGCCTCTACCACATGTTTGATAAGGTGGTCTTGCTCTCTGAAGGGAGCCCCATCTATTATGGCTCTGCTTCACCTGCCATGGAGTACTTTTCCTCACTTGGTTTTTCCACATCCATGACTGTCAATCCAGCTGATCTGTTGCTTGATCTTGCTAATGGGATTGCCCCGGATTCCAAGCATGCAACTGAACAAAGTGAGAACCAGGAACAAGAAAGGAAGTTGGTGAGAGAGGCTCTCATCTCTGCCTATGTCAAGAACATAGCTACAAGGCTGAAAGCTGAGCTTTGCAGCATGGAGGTGGACAACTACAACATCACAAAAGATGGTTCTGCAAGAAATCACATAAAACCAGAGCAATGGTGCACAAGTTGGTGGCATCAGTTTAAAGTACTGTTGCAAAGGGGACTGAAAGAACGAAGATATGATGCCTTCAATAGGCTGAGAATATTCCAAGTCATAAGTGTTGCTTTTCTTGGTGGACTCCTGTGGTGGCACACACCAGAATCCCACATTGGAGACCGGGTAGCCCTGCTTTTTTTCTTCTCTGTTTTCTGGGGATTCTACCCTCTCTACAATGCTGTTTTTACATTTCCTCAAGAGAGAAGAATGCTGATCAAGGAACGGTCATCAGGAATGTACCGTCTTTCTTCCTACTTTCTAGCTAGAACAATAGGAGACTTGCCATTGGAGCTTGCACTTCCAACTGCATTTGTGTTCATAATTTATTGGATGGGAGGACTTAAGCCTCATCCTGTGACCTTTATCCTTTCCCTTATTGTGGTTCTTTATAGTGTCCTTGTCTCTCAAAGTCTTGGCTTAGCATTTGGTGCTATTTTGATGGAGGTTAAACAGGCCACTACTTTAGCTTCTGTGACAACACTTGTATTTCTCATTGCTGGAGGGTACTATATACAACAGATTCCTCCTTTCATAGAGTGGCTCAAGTACTTAAGCTATAGCTACTATTGTTACAAGCTTCTTCTTGGTGTGCAATTCAATAATGATGACTATTATGAGTGCTCAAAGGGGGTCTTGTGCAAGGTTGGAGATTTTCCTCCTATTAAATCAATGGGCTTGAATCATTTGTGGGTTGATGTGTCTATTATGGCCCTGATGTTGGTGGGATATAGACTAGTTGCTTATTTAGCACTACAGAGAGTGAGGTAG 1971 0.4343 MSQNCIAPKPEHFNSHPLEGPPPEMTEPHNSTVHSYPIQTNEQALAKLTMYPITLKFEDLVYKVKLEQKSLCWGSTWTSKEKTILNGVTGMVCPGEILAMLGPSGSGKTTLLTALGGRLSGKLSGKITYNNQPFSGAMKRNTGFVAQDDVLYPHLTVIETLVFTALLRLPNSLTRYEKVQHVESVINELGLNRCRNSMIGGPLFRGISGGEKKRVSIGQEMLINPSLLLLDEPTSGLDSTTAQRILNTIKCLASGGRTVVTTIHQPSSRLYHMFDKVVLLSEGSPIYYGSASPAMEYFSSLGFSTSMTVNPADLLLDLANGIAPDSKHATEQSENQEQERKLVREALISAYVKNIATRLKAELCSMEVDNYNITKDGSARNHIKPEQWCTSWWHQFKVLLQRGLKERRYDAFNRLRIFQVISVAFLGGLLWWHTPESHIGDRVALLFFFSVFWGFYPLYNAVFTFPQERRMLIKERSSGMYRLSSYFLARTIGDLPLELALPTAFVFIIYWMGGLKPHPVTFILSLIVVLYSVLVSQSLGLAFGAILMEVKQATTLASVTTLVFLIAGGYYIQQIPPFIEWLKYLSYSYYCYKLLLGVQFNNDDYYECSKGVLCKVGDFPPIKSMGLNHLWVDVSIMALMLVGYRLVAYLALQRVR* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03116 656 FunFam ABC transporter G family member 22 72 301 - -
Rops2g03116 656 Pfam ABC transporter 85 235 IPR003439 GO:0005524
Rops2g03116 656 CDD ABCG_EPDR 52 289 - -
Rops2g03116 656 Gene3D - 72 301 IPR027417 -
Rops2g03116 656 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 55 307 IPR003439 GO:0005524
Rops2g03116 656 ProSitePatterns ABC transporters family signature. 207 221 IPR017871 GO:0005524|GO:0016887
Rops2g03116 656 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 78 300 IPR027417 -
Rops2g03116 656 MobiDBLite consensus disorder prediction 1 34 - -
Rops2g03116 656 SMART AAA_5 94 284 IPR003593 GO:0016887
Rops2g03116 656 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 37 649 - -
Rops2g03116 656 Pfam ABC-2 type transporter 395 600 IPR013525 GO:0016020|GO:0140359
Rops2g03116 656 Pfam ABC-2 type transporter 264 358 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03116 Rops-Chr2 56583781 56586583 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03116 95 292 Calmodulin-binding Proteins AT2G36910 24.390 1.31e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03116 K05681 - gmx:100780191 1135.55