Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03112 ATGGTTGGCCAAGTCAAGTCAAATCCTATGGTTGTTTGTACTATTGAGGAGTCTGGAGAACACATTGTTGCTGGTGCAGGAGAGCTTCATCTTGAGATCTGTTTGAAGGACTTGCAGGAAGATTTTATGGGTGGAGCTGAGATTATTAAATCTGACCCTGTTGTGTCATTCAGGGAGATTGTTCTGGAGAGATCATGCCACACTGTGATGAGCAAGTCACCCAACAAGCACAACTGTTTGTACATGGAAGCAAGACCAATGGAGGATGGGCTAGCAGAGGCCATTGATGATAGCAAGATTGGACCAAGGGATGACCCCAAAGTCCGTTCTAAAATCTTGGCAAAAGAATATGGTTGGGATAAAGATCTTGCCAAGAAAATCAGGTGTTTTGGACCTGAGACCATTGGACCCATCATGGTGGTTGATATGTGTAAGGGAGTACAGTATTTGAATGAAATCAAGGATTCTGTAGTTGCTGGATTCTAG 486 0.4362 MVGQVKSNPMVVCTIEESGEHIVAGAGELHLEICLKDLQEDFMGGAEIIKSDPVVSFREIVLERSCHTVMSKSPNKHNCLYMEARPMEDGLAEAIDDSKIGPRDDPKVRSKILAKEYGWDKDLAKKIRCFGPETIGPIMVVDMCKGVQYLNEIKDSVVAGF* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03112 161 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 6 161 - -
Rops2g03112 161 Pfam Elongation factor G, domain IV 104 161 IPR005517 GO:0005525
Rops2g03112 161 Gene3D - 62 161 IPR014721 -
Rops2g03112 161 Gene3D Elongation Factor G (Translational Gtpase), domain 3 4 56 - -
Rops2g03112 161 SUPERFAMILY Ribosomal protein S5 domain 2-like 55 161 IPR020568 -
Rops2g03112 161 FunFam Translation elongation factor 2 4 56 - -
Rops2g03112 161 SUPERFAMILY EF-G C-terminal domain-like 6 53 IPR035647 -
Rops2g03112 161 CDD aeEF2_snRNP_like_IV 52 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03112 Rops-Chr2 56473577 56474062 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03112 6 161 Eukaryotic Initiation Factors Gene Family AT1G56070 87.821 1.12e-93 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03112 K03234 - tcc:18594569 294.664