Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03098 ATGGAGAGTGCAAGAATCACACAATGGTTAAATCTTCTAGTATGTGTGCTGCTATTGCTAAAGGCAGAAGGGGATTTCGTTCCAATAACTCGTGTTGAGAATGCAGTATCAAAAGGAGCTGTTTGTTTGGATGGCACTGCCCCAGCATACCACTTTGATAAGGGTTCTGGAGAAGGGGTTCACAACTGGATTGTTCATCTTGAGGGAGGAGGATGGTGCAACAATGTCACTTCTTGCCTTTACCGTAAGGACACTCGTTTAGGTTCATCTAACCAAATGGATGAGCAAGTTGCCTTTTCTGGATATTTAAGTAACAGCAAACAGTTTAATCCAGATTTCTACAATTGGAACAGAATCAAGGTTAGGTACTGTGATGGGGCATCATTTACTGGTGATGTGGAAGAAGTTGATCCAACAACCAATTTGCACTTCAGAGGAGCAAGGGTTTTTGCTGCAGTAATAGAAGACTTACTAGAAAAAGGAATGGAAAATGCTGAAAATGCTATTCTCTCTGGATGTTCAGCTGGAGGATTGGCTACCATATTAAACTGTGATCGCTTTAAATCACTATTACCTGGAGGAGCTAACGTGAAATGCGTTTCAGATGCTGGTTATTTTATCAATGTAAAGGATATCTCAGGAGAACACCACATTGAAGAGTTCTACAATCAAGTTGTTGAAACACATGGCTCAGAAAAACATTTGCCTCCATCCTGCACATCAAGACTCAGTCAAGGGATGTGCTTTTTCCCACAATATGTGGCATCACAAATCAGTACACCAATCTTCTTTGTAAATGCGGCCTATGACTCATGGCAGATCAAGAACATCTTGGCACCGGGTATTGCTGATCCCCATGGCCTTTGGCGTAGCTGCAAGCTCAATATAAACAACTGCTCACCTGATCAACTAAGTATAATGCAAGACTTCAGGATGGAATTCGTAAGGGCATTGAGTGAGATAGGCAACTCTCCATCTAATGGAATGTTTATAGACTCTTGCTATGTCCACTGCCAAACAGAAACACAAGAGACATGGTATACAAGTGACTCTCCGCAGCTTGCCAATGAAACAATTGCCAATGCAGTTGGAGACTGGTTCTACGAACGAAGTCCTTTCCATCAGATAGATTGCAGTTACCCTTGCAACCCTACTTGTCGTAACCGTGTTCTTGATTCATTAGCCTACCCAGGAATATAG 1200 0.4217 MESARITQWLNLLVCVLLLLKAEGDFVPITRVENAVSKGAVCLDGTAPAYHFDKGSGEGVHNWIVHLEGGGWCNNVTSCLYRKDTRLGSSNQMDEQVAFSGYLSNSKQFNPDFYNWNRIKVRYCDGASFTGDVEEVDPTTNLHFRGARVFAAVIEDLLEKGMENAENAILSGCSAGGLATILNCDRFKSLLPGGANVKCVSDAGYFINVKDISGEHHIEEFYNQVVETHGSEKHLPPSCTSRLSQGMCFFPQYVASQISTPIFFVNAAYDSWQIKNILAPGIADPHGLWRSCKLNINNCSPDQLSIMQDFRMEFVRALSEIGNSPSNGMFIDSCYVHCQTETQETWYTSDSPQLANETIANAVGDWFYERSPFHQIDCSYPCNPTCRNRVLDSLAYPGI* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03098 399 Pfam Pectinacetylesterase 21 372 IPR004963 GO:0016787
Rops2g03098 399 PANTHER NOTUM-RELATED 10 388 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03098 Rops-Chr2 55947294 55951440 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03098 5 399 Carbohydrate Esterase AT4G19420 59.767 0.0 552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03098 K19882 - gmx:100776802 634.024