Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03097 ATGGACCAATTGTTATGTTTTCTAATATGTACACTACTATTACTTAAGGCTGAAGGGATTCCTGTGCCAATCAGTTATGTTCAAAGTGCAGTAGCAAAGGGAGCTGTTTGTTTGGATGGAAGTCCTCCAGCTTACCATTTTCATAAGGGATTTGAAGCAGGGATTGACAACTGGATTGTTCACTTTGAGGGAGGAGGATGGTGCAACAATGTCACTACTTGTCTTTCCCGTAGGGACACTCGATTAGGTTCTTCTAAAAAAATGGTTCAGCAACTTTCCTTTTCCGGATTTTTTAGTAACAAGCAAAAGTTTAATCCAGATTTCTACAACTGGAACAGAATCAAGGTTAGGTATTGTGATGGGTCATCATTTACAGGTGACGTTGAAGCTGTTGATCCAAAAACCAATTTGCAATTCAGAGGAGGAAGGGTGTTTGTTGCTGTCATTGAGGATTTACTAGCAAAAGGAATGAAAAATGCGAAAAATGCAATTCTCTCTGGATGTTCAGCTGGAGGATTGACTGCTATTTTACAATGTGATCGCTTCAAATCTCTGCTACCTGCAGCAGCTAAAGTGAAATGTCTTTCAGATGCTGGTTATTTTATCAATGCAAAGGATGTCTCTGGAGCACAACGCATTGAAGAGTTCTACAGTCAAGTTGTTGCAACACATGGCTCAGCAAAGAATTTACCTCAATCCTGCACTTCAAGACTCAGACCAGGGCTGTGCTTTTTCCCGCAAAATGTGGCAGCACAAATCAAGACGCCAATCTTCTTTGTAAATGCAGCCTATGACTCATGGCAGATTAAGAACATTTTGGCACCGGGTGTTGCTGATCCCCATGGCACTTGGCGTAAATGCAAGCTTAATATAACCAACTGCTCACCAAATCAATTAAGCGTATTGCAAGGCTTCAGGAAACAATTCTTAAAGGCATTGAGAGTGCTTGGCAACTCTCCATCTAAAGGAATGTTCATAGATGGTTGCTATGCCCACTGTCAAACTGGAATGCAGGAAACATGGTTGAGAAATGACTCTCCAGTTCTGGCCAATACAACAATTGCAAAGGCAGTGGGAGATTGGTATTATAATCGAAGATCTTTCCATCAGAAAGATTGCGCTTACCCTTGCAACCCTACTTGTCATAACCGTGTTTTTGAACAAAAACGGCCTTCCAAGAGTGAAGATTCATTTAACTATTCATATCATTTCTACAAAACTACAGTCAATGGTTAA 1236 0.407 MDQLLCFLICTLLLLKAEGIPVPISYVQSAVAKGAVCLDGSPPAYHFHKGFEAGIDNWIVHFEGGGWCNNVTTCLSRRDTRLGSSKKMVQQLSFSGFFSNKQKFNPDFYNWNRIKVRYCDGSSFTGDVEAVDPKTNLQFRGGRVFVAVIEDLLAKGMKNAKNAILSGCSAGGLTAILQCDRFKSLLPAAAKVKCLSDAGYFINAKDVSGAQRIEEFYSQVVATHGSAKNLPQSCTSRLRPGLCFFPQNVAAQIKTPIFFVNAAYDSWQIKNILAPGVADPHGTWRKCKLNITNCSPNQLSVLQGFRKQFLKALRVLGNSPSKGMFIDGCYAHCQTGMQETWLRNDSPVLANTTIAKAVGDWYYNRRSFHQKDCAYPCNPTCHNRVFEQKRPSKSEDSFNYSYHFYKTTVNG* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03097 411 PANTHER NOTUM-RELATED 13 383 IPR004963 GO:0016787
Rops2g03097 411 Pfam Pectinacetylesterase 16 366 IPR004963 GO:0016787
Rops2g03097 411 SUPERFAMILY alpha/beta-Hydrolases 142 267 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03097 Rops-Chr2 55892677 55898299 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03097 1 386 Carbohydrate Esterase AT4G19420 58.907 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03097 K19882 - gmx:100781246 681.404