Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03096 ATGATAGCAATAGAATCCAGTTGCATTGGTGGAAGGGTGCTAGACAACCAGAAAAGGAAGAAGGAGGAAGAGGAGAACCGAGTTGCTGGGTTGATCTCCGAAGAGCCACTCTGGAGCAAGCTTGCTACTAGCTCAAACACCACGTTTTCCAGATTCTTTCAAGTACATTACTTCATCTTCCATCTAAGAATGAAGTACACAAGAATGGATCAATTGTTAAGTCTTCTAATATGTGTAATGCTATTACTTAAGGCAGAAGGGATTTCTGTGCCAATCAGTTTTGTCCAAAGTGCAGTAGCAAAAGGAGCTGTTTGTTTGGATGGAAGTCCTCCTGCTTACCATTTTCATAAGGGATTTGGAGCAGGGATTGACAACTGGATTGTTCACTTTGAGGGAGGAGGATGGTGCAACAATGTCACTACTTGTCTTTCCCGTAGGGACACTCGATTAGGTTCTTCTAAAAAAATGGATAAGGAACTTTCCTTTTCCGGATTTTTTAGTAACAAGCAAAAGTTTAATCCAGATTTCTACAATTGGAACAGAATCAAGGTTAGATATTGTGATGGGTCATCATTTACTGGTGACATTGAAGCTGTCGATCCAAAAACCAATTTGCACTTCAGAGGAGGCAGGGTGTTTGTTGCTGTCGTTGAGGATTTACTAGCAAAAGGAATGAAAAATGCTAAAAATGCAATTCTCTCTGGATGTTCAGCTGGAGGATTGACTTCTATTTTACAATGTGATCGCTTCAAATCTCTGCTACCTGCAGCAGCTAAAGTGAAATGTCTATCAGATGCTGGTTATTTTATCAATGTAAAGGATGTCGCAGGAGCACAACACATTGAAGAGTTATACAGTCAAGTTGTTGCAACACATGGCTCAGCAAAGAATTTACCTCCATCCTGCACTTCAAGACTCAGACCAGGGCTGTGCTTTTTCCCGCAAAATGTGGCAGCACAAATCCGTACGCCAATCTTCTTTGTAAATGCGGCCTACGACTCATGGCAGATTAAGAACATTTTGGCACCGGGTGTTGCTGATCCCCATGGCACTTGGCGTAATTGCAAGCTTGATATAACCAACTGCTCACCAAATCAATTAAGTGTAATGCAAGGCTTCAGGACAGAATTCTTAAAGGCATTGAGTGTGCTTGAAAACTCTCCATCAAAAGCAATGTTTATAGATGGTTGCTATGCCCACTGCCAAACTGGAATGCAGGAAACATGGTTGAGAAATGATTCTCCAGTTCTGGCCAATACTACAATAGCAAAGGCAGTGGGAGATTGGTACTATGATCGAAGGTCTTTCCATCAGATAGATTGCACTTACCCTTGCAACCCTACTTGCCATAACCGTGTTTTTGATCAAAACAACCTTCCAGGAGTATAG 1389 0.4176 MIAIESSCIGGRVLDNQKRKKEEEENRVAGLISEEPLWSKLATSSNTTFSRFFQVHYFIFHLRMKYTRMDQLLSLLICVMLLLKAEGISVPISFVQSAVAKGAVCLDGSPPAYHFHKGFGAGIDNWIVHFEGGGWCNNVTTCLSRRDTRLGSSKKMDKELSFSGFFSNKQKFNPDFYNWNRIKVRYCDGSSFTGDIEAVDPKTNLHFRGGRVFVAVVEDLLAKGMKNAKNAILSGCSAGGLTSILQCDRFKSLLPAAAKVKCLSDAGYFINVKDVAGAQHIEELYSQVVATHGSAKNLPPSCTSRLRPGLCFFPQNVAAQIRTPIFFVNAAYDSWQIKNILAPGVADPHGTWRNCKLDITNCSPNQLSVMQGFRTEFLKALSVLENSPSKAMFIDGCYAHCQTGMQETWLRNDSPVLANTTIAKAVGDWYYDRRSFHQIDCTYPCNPTCHNRVFDQNNLPGV* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03096 462 Coils Coil 14 34 - -
Rops2g03096 462 PANTHER NOTUM-RELATED 76 451 IPR004963 GO:0016787
Rops2g03096 462 Pfam Pectinacetylesterase 84 434 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03096 Rops-Chr2 55870149 55896279 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03096 68 462 Carbohydrate Esterase AT4G19420 58.837 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03096 K19882 - gmx:100781246 707.983