Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03089 ATGAAGCATCCATCAAAGCCATGGAGGCCATTAACAACAAATTGTTGCACAACTGAAGGTCAAACTATCATTGGCAATTTCAATAGCTGCAAGCCCTCAAGTTCAAATGTGTCCAAGGACATTGTTCCATTACCTTCATTTAATTGGTCGTTTTTCTCTGATATTGGCCACTCCTCTTCCATAAGATCCAAAGAAGATCTTGCACAATCTTTTAGCTCGAGTTTGTATGATTTTCAGCTGAGTGAGCTGTGTGCTGTTACCCAGAATTTTTCTAGCAATTTCTTGCTGGGTGAAGGTGGATTTGGAGCAGTTCATAAGGGTTATATAGATGGTAACTTGAGGTGTGGTTTGAAAGCTCAGCCTGTTGCCGTTAAGGTTCTCAAGATTGAAGGCTTACAAGGACACCGTGAGTGGCAAGCAGAAGTGATATTTCTTGGACGACTAAGCCATCAAAATTTAGTCAAATTGATTGGGTATTGTTGTAAGGATGACGAAAGGCTACTTGTCTACGAATTCATGCCAAGGGGAAGCTTGGAGAATCACTTGTTCAGAAGAACAACAACATCACCATCATGGGCAATAAGATTAAAAATTACAATTGGAGCGGCCAAAGGCCTTGCCTTCTTGCATGGAGCTGAGAATCCAGTCATTTTTCGAGACTTCAAGACTTCCAATATCTTGCTTGATTCAGATTTCACAGCAAAACTGTCAGATTTTGGATTTGCAAAAATGGGGCCAGTGGGGTCAAAGTCACACGTTACAACCAGAGTTATGGGCACCTATGGATATGCAGCCCCAGAATACATCTCCACAGGGAACTTGACAACAAAAAGTGATGTCTATAGCTTCGGGGTGGTCCTGTTAGAACTGCTTACAGGAAGGAGAGCAATCGATAAGAAAAGACCAAAAACTGAGCAAAACCTTGTAAACTGGTCAAGACCTTTCTTGAATAATAGCAAGAGATTGCGATGTATTATGGATCCAAGGCTTGTAGGTCAATATTCTATCAAGGGTGCAAAGGAGATGGCCTTTTTGGCATTGCAGTGTATTAGTTTGAATCCTAAAGACAGGCCAAGAATGCCAAAAGTTGTGGAAACTCTGGAAAGCTTGCAACAGTTCAAGGACATGGCAGTTACACGTGGACACTGGCCAGCATCACCACAATGCACTACAAATAGACCGTCCAATAAGGTGAAAATTGATCTTAGAGCAGGTGCAAGCCACAGACGGCTCTCTCCTCTAGTTTCAAACAGAACAACTTGA 1263 0.4212 MKHPSKPWRPLTTNCCTTEGQTIIGNFNSCKPSSSNVSKDIVPLPSFNWSFFSDIGHSSSIRSKEDLAQSFSSSLYDFQLSELCAVTQNFSSNFLLGEGGFGAVHKGYIDGNLRCGLKAQPVAVKVLKIEGLQGHREWQAEVIFLGRLSHQNLVKLIGYCCKDDERLLVYEFMPRGSLENHLFRRTTTSPSWAIRLKITIGAAKGLAFLHGAENPVIFRDFKTSNILLDSDFTAKLSDFGFAKMGPVGSKSHVTTRVMGTYGYAAPEYISTGNLTTKSDVYSFGVVLLELLTGRRAIDKKRPKTEQNLVNWSRPFLNNSKRLRCIMDPRLVGQYSIKGAKEMAFLALQCISLNPKDRPRMPKVVETLESLQQFKDMAVTRGHWPASPQCTTNRPSNKVKIDLRAGASHRRLSPLVSNRTT* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03089 420 Gene3D Phosphorylase Kinase; domain 1 54 172 - -
Rops2g03089 420 Gene3D Transferase(Phosphotransferase) domain 1 173 382 - -
Rops2g03089 420 FunFam Serine/threonine-protein kinase PBS1 173 382 - -
Rops2g03089 420 SUPERFAMILY Protein kinase-like (PK-like) 70 368 IPR011009 -
Rops2g03089 420 ProSiteProfiles Protein kinase domain profile. 90 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03089 420 CDD STKc_IRAK 96 370 - -
Rops2g03089 420 ProSitePatterns Protein kinases ATP-binding region signature. 96 125 IPR017441 GO:0005524
Rops2g03089 420 FunFam Serine/threonine-protein kinase BIK1 57 172 - -
Rops2g03089 420 PANTHER OS01G0588500 PROTEIN-RELATED 60 371 - -
Rops2g03089 420 Pfam Protein tyrosine and serine/threonine kinase 96 367 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03089 Rops-Chr2 55713418 55713903 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03089 78 410 Glycoside Hydrolase AT3G07070 48.810 4.19e-103 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Rops2g03089 PK_Tyr_Ser-Thr 1.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03089 - - gmx:100804970 661.373